Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
RPA3P35244 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.73■□□□□ 0.75
RPA3P35244 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 AC007613.1-201ENST00000572811 2597 ntBASIC19.73■□□□□ 0.75
RPA3P35244 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.73■□□□□ 0.75
RPA3P35244 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.73■□□□□ 0.75
RPA3P35244 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RPA3P35244 AL355472.2-201ENST00000422958 438 ntBASIC19.73■□□□□ 0.75
RPA3P35244 CYP2T3P-201ENST00000601990 817 ntBASIC19.73■□□□□ 0.75
RPA3P35244 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.73■□□□□ 0.75
RPA3P35244 KRT8P17-201ENST00000453110 1448 ntBASIC19.73■□□□□ 0.75
RPA3P35244 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RPA3P35244 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPA3P35244 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RPA3P35244 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.72■□□□□ 0.75
RPA3P35244 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPA3P35244 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPA3P35244 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RPA3P35244 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
RPA3P35244 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPA3P35244 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.72■□□□□ 0.75
RPA3P35244 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RPA3P35244 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPA3P35244 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPA3P35244 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPA3P35244 KRT18P68-201ENST00000392293 1000 ntBASIC19.72■□□□□ 0.75
RPA3P35244 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.72■□□□□ 0.75
RPA3P35244 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPA3P35244 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.72■□□□□ 0.75
RPA3P35244 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RPA3P35244 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.72■□□□□ 0.75
RPA3P35244 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPA3P35244 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPA3P35244 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.72■□□□□ 0.75
RPA3P35244 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPA3P35244 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPA3P35244 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPA3P35244 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPA3P35244 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.71■□□□□ 0.75
RPA3P35244 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.71■□□□□ 0.75
RPA3P35244 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.71■□□□□ 0.75
RPA3P35244 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPA3P35244 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RPA3P35244 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPA3P35244 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPA3P35244 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPA3P35244 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPA3P35244 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPA3P35244 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RPA3P35244 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.71■□□□□ 0.75
RPA3P35244 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.71■□□□□ 0.75
RPA3P35244 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.71■□□□□ 0.75
RPA3P35244 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.71■□□□□ 0.75
RPA3P35244 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPA3P35244 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.71■□□□□ 0.75
RPA3P35244 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.71■□□□□ 0.75
RPA3P35244 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.71■□□□□ 0.75
RPA3P35244 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPA3P35244 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
RPA3P35244 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPA3P35244 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPA3P35244 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.71■□□□□ 0.75
RPA3P35244 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPA3P35244 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RPA3P35244 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPA3P35244 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPA3P35244 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.7■□□□□ 0.74
RPA3P35244 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPA3P35244 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPA3P35244 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.7■□□□□ 0.74
RPA3P35244 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPA3P35244 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.7■□□□□ 0.74
RPA3P35244 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPA3P35244 BX276092.2-201ENST00000417668 665 ntBASIC19.7■□□□□ 0.74
RPA3P35244 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.7■□□□□ 0.74
RPA3P35244 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RPA3P35244 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.7■□□□□ 0.74
RPA3P35244 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.7■□□□□ 0.74
RPA3P35244 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.7■□□□□ 0.74
RPA3P35244 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPA3P35244 AL109923.1-201ENST00000618799 583 ntBASIC19.7■□□□□ 0.74
RPA3P35244 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.7■□□□□ 0.74
RPA3P35244 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPA3P35244 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPA3P35244 CROCCP3-202ENST00000420820 1947 ntBASIC19.7■□□□□ 0.74
RPA3P35244 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms