Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA3P32297 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CHRNA3P32297 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CHRNA3P32297 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CHRNA3P32297 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA3P32297 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.58■□□□□ 0.89
CHRNA3P32297 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA3P32297 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CHRNA3P32297 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA3P32297 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA3P32297 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CHRNA3P32297 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.58■□□□□ 0.89
CHRNA3P32297 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA3P32297 AL031963.3-201ENST00000606441 850 ntBASIC20.58■□□□□ 0.89
CHRNA3P32297 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA3P32297 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA3P32297 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.58■□□□□ 0.88
CHRNA3P32297 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA3P32297 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA3P32297 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA3P32297 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA3P32297 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA3P32297 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA3P32297 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA3P32297 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.58■□□□□ 0.88
CHRNA3P32297 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA3P32297 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHRNA3P32297 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHRNA3P32297 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.57■□□□□ 0.88
CHRNA3P32297 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.57■□□□□ 0.88
CHRNA3P32297 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CHRNA3P32297 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNA3P32297 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA3P32297 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA3P32297 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA3P32297 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA3P32297 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA3P32297 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA3P32297 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CHRNA3P32297 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.56■□□□□ 0.88
CHRNA3P32297 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 AC092368.3-202ENST00000574180 1591 ntBASIC20.56■□□□□ 0.88
CHRNA3P32297 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CHRNA3P32297 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 KRT8P20-201ENST00000423953 1409 ntBASIC20.56■□□□□ 0.88
CHRNA3P32297 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNA3P32297 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CHRNA3P32297 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CHRNA3P32297 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.56■□□□□ 0.88
CHRNA3P32297 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNA3P32297 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNA3P32297 PNMA6B-201ENST00000538162 1200 ntBASIC20.56■□□□□ 0.88
CHRNA3P32297 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 ITM2C-210ENST00000620962 501 ntBASIC20.56■□□□□ 0.88
CHRNA3P32297 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CHRNA3P32297 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNA3P32297 AL032819.2-201ENST00000624543 2162 ntBASIC20.56■□□□□ 0.88
CHRNA3P32297 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CHRNA3P32297 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNA3P32297 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA3P32297 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNA3P32297 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CHRNA3P32297 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.56■□□□□ 0.88
CHRNA3P32297 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CHRNA3P32297 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA3P32297 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.55■□□□□ 0.88
CHRNA3P32297 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA3P32297 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA3P32297 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CHRNA3P32297 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA3P32297 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA3P32297 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA3P32297 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA3P32297 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA3P32297 KRT18P29-201ENST00000397031 1267 ntBASIC20.55■□□□□ 0.88
CHRNA3P32297 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA3P32297 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNA3P32297 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.55■□□□□ 0.88
CHRNA3P32297 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA3P32297 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNA3P32297 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNA3P32297 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA3P32297 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA3P32297 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA3P32297 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA3P32297 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CHRNA3P32297 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA3P32297 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA3P32297 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms