Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APCP25054 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
APCP25054 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.53■□□□□ 0.24
APCP25054 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.53■□□□□ 0.24
APCP25054 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
APCP25054 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APCP25054 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APCP25054 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APCP25054 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APCP25054 KRT8P41-201ENST00000533985 1514 ntBASIC16.52■□□□□ 0.24
APCP25054 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
APCP25054 TSPY19P-201ENST00000418461 509 ntBASIC16.52■□□□□ 0.24
APCP25054 TSPY18P-201ENST00000441642 509 ntBASIC16.52■□□□□ 0.24
APCP25054 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
APCP25054 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.52■□□□□ 0.24
APCP25054 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.52■□□□□ 0.24
APCP25054 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
APCP25054 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
APCP25054 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.52■□□□□ 0.24
APCP25054 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
APCP25054 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
APCP25054 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
APCP25054 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
APCP25054 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
APCP25054 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
APCP25054 AL355385.1-201ENST00000606123 409 ntBASIC16.52■□□□□ 0.23
APCP25054 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
APCP25054 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.52■□□□□ 0.23
APCP25054 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.52■□□□□ 0.23
APCP25054 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
APCP25054 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
APCP25054 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
APCP25054 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.51■□□□□ 0.23
APCP25054 KRT16P4-201ENST00000453883 522 ntBASIC16.51■□□□□ 0.23
APCP25054 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
APCP25054 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
APCP25054 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
APCP25054 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.51■□□□□ 0.23
APCP25054 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.51■□□□□ 0.23
APCP25054 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.51■□□□□ 0.23
APCP25054 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APCP25054 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
APCP25054 AC242852.2-201ENST00000615738 1807 ntBASIC16.51■□□□□ 0.23
APCP25054 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APCP25054 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
APCP25054 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.51■□□□□ 0.23
APCP25054 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.51■□□□□ 0.23
APCP25054 AC011498.5-201ENST00000592027 486 ntBASIC16.51■□□□□ 0.23
APCP25054 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.51■□□□□ 0.23
APCP25054 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
APCP25054 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APCP25054 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.51■□□□□ 0.23
APCP25054 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APCP25054 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.51■□□□□ 0.23
APCP25054 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.51■□□□□ 0.23
APCP25054 BX276092.5-203ENST00000456199 560 ntBASIC16.51■□□□□ 0.23
APCP25054 AF228730.7-201ENST00000641842 219 ntBASIC16.51■□□□□ 0.23
APCP25054 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APCP25054 AC005229.4-201ENST00000610085 2198 ntBASIC16.5■□□□□ 0.23
APCP25054 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APCP25054 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
APCP25054 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APCP25054 LINC02084-201ENST00000606069 1096 ntBASIC16.5■□□□□ 0.23
APCP25054 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.5■□□□□ 0.23
APCP25054 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
APCP25054 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.5■□□□□ 0.23
APCP25054 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APCP25054 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.5■□□□□ 0.23
APCP25054 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.5■□□□□ 0.23
APCP25054 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.5■□□□□ 0.23
APCP25054 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APCP25054 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
APCP25054 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.5■□□□□ 0.23
APCP25054 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
APCP25054 CHCHD2P8-201ENST00000429873 447 ntBASIC16.5■□□□□ 0.23
APCP25054 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.5■□□□□ 0.23
APCP25054 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.5■□□□□ 0.23
APCP25054 LINC01465-201ENST00000408887 1940 ntBASIC16.5■□□□□ 0.23
APCP25054 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APCP25054 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.49■□□□□ 0.23
APCP25054 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
APCP25054 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
APCP25054 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APCP25054 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APCP25054 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.49■□□□□ 0.23
APCP25054 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.49■□□□□ 0.23
APCP25054 AL121672.3-201ENST00000608644 468 ntBASIC16.49■□□□□ 0.23
APCP25054 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.49■□□□□ 0.23
APCP25054 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APCP25054 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APCP25054 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.49■□□□□ 0.23
APCP25054 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.49■□□□□ 0.23
APCP25054 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.49■□□□□ 0.23
APCP25054 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
APCP25054 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
APCP25054 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.49■□□□□ 0.23
APCP25054 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
APCP25054 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.48■□□□□ 0.23
APCP25054 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
APCP25054 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms