Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CHMP24386 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.24■□□□□ 0.51
CHMP24386 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP24386 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP24386 ITM2C-210ENST00000620962 501 ntBASIC18.24■□□□□ 0.51
CHMP24386 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP24386 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP24386 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CHMP24386 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP24386 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CHMP24386 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP24386 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP24386 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP24386 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CHMP24386 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP24386 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHMP24386 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHMP24386 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CHMP24386 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP24386 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CHMP24386 Z82202.1-201ENST00000623446 1880 ntBASIC18.23■□□□□ 0.51
CHMP24386 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP24386 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.23■□□□□ 0.51
CHMP24386 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP24386 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.23■□□□□ 0.51
CHMP24386 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHMP24386 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHMP24386 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP24386 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP24386 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP24386 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP24386 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 ESRRAP1-201ENST00000400596 1257 ntBASIC18.22■□□□□ 0.51
CHMP24386 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP24386 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.22■□□□□ 0.51
CHMP24386 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CHMP24386 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.22■□□□□ 0.51
CHMP24386 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.22■□□□□ 0.51
CHMP24386 AC026366.1-201ENST00000488803 879 ntBASIC18.22■□□□□ 0.51
CHMP24386 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP24386 AP003097.1-201ENST00000530657 1135 ntBASIC18.22■□□□□ 0.51
CHMP24386 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.22■□□□□ 0.51
CHMP24386 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.22■□□□□ 0.51
CHMP24386 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
CHMP24386 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.22■□□□□ 0.51
CHMP24386 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.22■□□□□ 0.51
CHMP24386 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CHMP24386 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP24386 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CHMP24386 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CHMP24386 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CHMP24386 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP24386 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CHMP24386 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.21■□□□□ 0.51
CHMP24386 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP24386 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms