Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AL049637.2-201ENST00000641778 930 ntBASIC19.73■□□□□ 0.75
XPAP23025 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
XPAP23025 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.73■□□□□ 0.75
XPAP23025 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
XPAP23025 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.73■□□□□ 0.75
XPAP23025 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
XPAP23025 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
XPAP23025 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
XPAP23025 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.73■□□□□ 0.75
XPAP23025 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.73■□□□□ 0.75
XPAP23025 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.72■□□□□ 0.75
XPAP23025 LINC01521-201ENST00000504184 1943 ntBASIC19.72■□□□□ 0.75
XPAP23025 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.72■□□□□ 0.75
XPAP23025 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
XPAP23025 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
XPAP23025 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.72■□□□□ 0.75
XPAP23025 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
XPAP23025 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.72■□□□□ 0.75
XPAP23025 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.72■□□□□ 0.75
XPAP23025 AL596275.1-201ENST00000423464 877 ntBASIC19.72■□□□□ 0.75
XPAP23025 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.72■□□□□ 0.75
XPAP23025 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.72■□□□□ 0.75
XPAP23025 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.72■□□□□ 0.75
XPAP23025 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.72■□□□□ 0.75
XPAP23025 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 AF186192.3-201ENST00000583427 947 ntBASIC19.72■□□□□ 0.75
XPAP23025 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.72■□□□□ 0.75
XPAP23025 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
XPAP23025 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.72■□□□□ 0.75
XPAP23025 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.72■□□□□ 0.75
XPAP23025 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XPAP23025 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.72■□□□□ 0.75
XPAP23025 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
XPAP23025 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.71■□□□□ 0.75
XPAP23025 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.71■□□□□ 0.75
XPAP23025 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
XPAP23025 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.71■□□□□ 0.75
XPAP23025 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
XPAP23025 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.71■□□□□ 0.75
XPAP23025 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XPAP23025 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
XPAP23025 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
XPAP23025 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
XPAP23025 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
XPAP23025 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
XPAP23025 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
XPAP23025 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.7■□□□□ 0.74
XPAP23025 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.7■□□□□ 0.74
XPAP23025 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XPAP23025 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XPAP23025 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XPAP23025 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.7■□□□□ 0.74
XPAP23025 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XPAP23025 KRT18P16-201ENST00000510337 1294 ntBASIC19.7■□□□□ 0.74
XPAP23025 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.7■□□□□ 0.74
XPAP23025 MIR4497-201ENST00000583208 89 ntBASIC19.7■□□□□ 0.74
XPAP23025 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XPAP23025 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.7■□□□□ 0.74
XPAP23025 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XPAP23025 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.7■□□□□ 0.74
XPAP23025 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
XPAP23025 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XPAP23025 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.7■□□□□ 0.74
XPAP23025 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
XPAP23025 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.69■□□□□ 0.74
XPAP23025 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.69■□□□□ 0.74
XPAP23025 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XPAP23025 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XPAP23025 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
XPAP23025 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XPAP23025 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.69■□□□□ 0.74
XPAP23025 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
XPAP23025 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XPAP23025 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms