Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 KRT8P9-201ENST00000558927 1449 ntBASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 DGCR10-201ENST00000609839 495 ntBASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 AC005363.2-201ENST00000618631 242 ntBASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB40ALP0C0E4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 LINC01568-207ENST00000641790 1380 ntBASIC18.42■□□□□ 0.54
RAB40ALP0C0E4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 MESTP1-201ENST00000404287 994 ntBASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 AC004980.1-204ENST00000429707 299 ntBASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 KRT18P22-201ENST00000402024 1347 ntBASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB40ALP0C0E4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 TMPOP1-202ENST00000424642 1267 ntBASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 B3GAT3P1-201ENST00000471720 806 ntBASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 AP005242.2-201ENST00000580065 1175 ntBASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 AC092865.7-201ENST00000641832 219 ntBASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms