Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CNP-204ENST00000472031 1019 ntTSL 2 BASIC25.87■■□□□ 1.73
COL5A2P05997 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC25.87■■□□□ 1.73
COL5A2P05997 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL5A2P05997 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
COL5A2P05997 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL5A2P05997 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL5A2P05997 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL5A2P05997 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL5A2P05997 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL5A2P05997 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.87■■□□□ 1.73
COL5A2P05997 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
COL5A2P05997 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC25.87■■□□□ 1.73
COL5A2P05997 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC25.86■■□□□ 1.73
COL5A2P05997 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.86■■□□□ 1.73
COL5A2P05997 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL5A2P05997 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
COL5A2P05997 STARP1-201ENST00000397973 869 ntBASIC25.86■■□□□ 1.73
COL5A2P05997 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL5A2P05997 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC25.86■■□□□ 1.73
COL5A2P05997 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL5A2P05997 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL5A2P05997 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC25.86■■□□□ 1.73
COL5A2P05997 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC25.86■■□□□ 1.73
COL5A2P05997 LY6E-213ENST00000522528 606 ntTSL 3 BASIC25.86■■□□□ 1.73
COL5A2P05997 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC25.86■■□□□ 1.73
COL5A2P05997 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
COL5A2P05997 NPAP1P7-201ENST00000613027 823 ntBASIC25.86■■□□□ 1.73
COL5A2P05997 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL5A2P05997 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL5A2P05997 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.86■■□□□ 1.73
COL5A2P05997 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC25.86■■□□□ 1.73
COL5A2P05997 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
COL5A2P05997 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
COL5A2P05997 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC25.86■■□□□ 1.73
COL5A2P05997 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL5A2P05997 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.86■■□□□ 1.73
COL5A2P05997 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC25.86■■□□□ 1.73
COL5A2P05997 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL5A2P05997 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
COL5A2P05997 NME1-207ENST00000480143 964 ntTSL 2 BASIC25.85■■□□□ 1.73
COL5A2P05997 NEK4P2-201ENST00000580004 1012 ntBASIC25.85■■□□□ 1.73
COL5A2P05997 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC25.85■■□□□ 1.73
COL5A2P05997 AC140113.3-201ENST00000605663 199 ntBASIC25.85■■□□□ 1.73
COL5A2P05997 AL691432.3-201ENST00000621860 400 ntBASIC25.85■■□□□ 1.73
COL5A2P05997 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL5A2P05997 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
COL5A2P05997 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC25.85■■□□□ 1.73
COL5A2P05997 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL5A2P05997 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
COL5A2P05997 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
COL5A2P05997 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL5A2P05997 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC25.85■■□□□ 1.73
COL5A2P05997 AP000523.1-201ENST00000398242 1049 ntBASIC25.85■■□□□ 1.73
COL5A2P05997 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL5A2P05997 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL5A2P05997 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL5A2P05997 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC25.85■■□□□ 1.73
COL5A2P05997 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL5A2P05997 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
COL5A2P05997 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL5A2P05997 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL5A2P05997 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC25.84■■□□□ 1.73
COL5A2P05997 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL5A2P05997 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL5A2P05997 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC25.84■■□□□ 1.73
COL5A2P05997 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL5A2P05997 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC25.84■■□□□ 1.73
COL5A2P05997 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL5A2P05997 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.84■■□□□ 1.73
COL5A2P05997 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL5A2P05997 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL5A2P05997 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC25.84■■□□□ 1.73
COL5A2P05997 BX119927.1-201ENST00000636596 1552 ntBASIC25.84■■□□□ 1.73
COL5A2P05997 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL5A2P05997 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
COL5A2P05997 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL5A2P05997 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.83■■□□□ 1.73
COL5A2P05997 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL5A2P05997 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL5A2P05997 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC25.83■■□□□ 1.73
COL5A2P05997 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC25.83■■□□□ 1.73
COL5A2P05997 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC25.83■■□□□ 1.73
COL5A2P05997 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL5A2P05997 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC25.83■■□□□ 1.73
COL5A2P05997 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25.83■■□□□ 1.73
COL5A2P05997 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC25.83■■□□□ 1.73
COL5A2P05997 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC25.83■■□□□ 1.72
COL5A2P05997 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25.82■■□□□ 1.72
COL5A2P05997 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
COL5A2P05997 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
COL5A2P05997 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL5A2P05997 IRF5-214ENST00000613821 595 ntTSL 5 BASIC25.82■■□□□ 1.72
COL5A2P05997 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL5A2P05997 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC25.82■■□□□ 1.72
COL5A2P05997 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
COL5A2P05997 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL5A2P05997 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
COL5A2P05997 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL5A2P05997 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC25.81■■□□□ 1.72
COL5A2P05997 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms