Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
APOA1P02647 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
APOA1P02647 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.41■□□□□ 0.38
APOA1P02647 PKD1P5-201ENST00000532415 10291 ntBASIC17.41■□□□□ 0.38
APOA1P02647 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
APOA1P02647 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APOA1P02647 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.41■□□□□ 0.38
APOA1P02647 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOA1P02647 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
APOA1P02647 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APOA1P02647 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOA1P02647 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APOA1P02647 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
APOA1P02647 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.41■□□□□ 0.38
APOA1P02647 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.41■□□□□ 0.38
APOA1P02647 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.4■□□□□ 0.38
APOA1P02647 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
APOA1P02647 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
APOA1P02647 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
APOA1P02647 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.4■□□□□ 0.38
APOA1P02647 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.4■□□□□ 0.38
APOA1P02647 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.4■□□□□ 0.38
APOA1P02647 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
APOA1P02647 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.4■□□□□ 0.38
APOA1P02647 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.4■□□□□ 0.38
APOA1P02647 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
APOA1P02647 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.4■□□□□ 0.38
APOA1P02647 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
APOA1P02647 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.4■□□□□ 0.38
APOA1P02647 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
APOA1P02647 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
APOA1P02647 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOA1P02647 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
APOA1P02647 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
APOA1P02647 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
APOA1P02647 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.39■□□□□ 0.38
APOA1P02647 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
APOA1P02647 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
APOA1P02647 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.39■□□□□ 0.38
APOA1P02647 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
APOA1P02647 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.39■□□□□ 0.37
APOA1P02647 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.39■□□□□ 0.37
APOA1P02647 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.39■□□□□ 0.37
APOA1P02647 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
APOA1P02647 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.39■□□□□ 0.37
APOA1P02647 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
APOA1P02647 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
APOA1P02647 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
APOA1P02647 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
APOA1P02647 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.39■□□□□ 0.37
APOA1P02647 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.39■□□□□ 0.37
APOA1P02647 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOA1P02647 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APOA1P02647 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.38■□□□□ 0.37
APOA1P02647 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.38■□□□□ 0.37
APOA1P02647 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOA1P02647 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOA1P02647 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
APOA1P02647 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
APOA1P02647 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOA1P02647 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
APOA1P02647 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
APOA1P02647 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
APOA1P02647 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms