Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.34■□□□□ 0.69
SUPT3HO75486 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.34■□□□□ 0.69
SUPT3HO75486 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SUPT3HO75486 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.34■□□□□ 0.69
SUPT3HO75486 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SUPT3HO75486 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
SUPT3HO75486 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.34■□□□□ 0.69
SUPT3HO75486 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SUPT3HO75486 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SUPT3HO75486 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SUPT3HO75486 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
SUPT3HO75486 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.33■□□□□ 0.69
SUPT3HO75486 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.33■□□□□ 0.69
SUPT3HO75486 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SUPT3HO75486 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SUPT3HO75486 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SUPT3HO75486 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SUPT3HO75486 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.33■□□□□ 0.68
SUPT3HO75486 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.33■□□□□ 0.68
SUPT3HO75486 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.33■□□□□ 0.68
SUPT3HO75486 RAP2CP1-201ENST00000605103 478 ntBASIC19.33■□□□□ 0.68
SUPT3HO75486 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SUPT3HO75486 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SUPT3HO75486 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.33■□□□□ 0.68
SUPT3HO75486 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SUPT3HO75486 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SUPT3HO75486 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SUPT3HO75486 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SUPT3HO75486 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.32■□□□□ 0.68
SUPT3HO75486 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SUPT3HO75486 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SUPT3HO75486 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SUPT3HO75486 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SUPT3HO75486 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SUPT3HO75486 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SUPT3HO75486 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SUPT3HO75486 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.32■□□□□ 0.68
SUPT3HO75486 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.32■□□□□ 0.68
SUPT3HO75486 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.32■□□□□ 0.68
SUPT3HO75486 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SUPT3HO75486 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.32■□□□□ 0.68
SUPT3HO75486 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.32■□□□□ 0.68
SUPT3HO75486 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SUPT3HO75486 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.32■□□□□ 0.68
SUPT3HO75486 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SUPT3HO75486 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SUPT3HO75486 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SUPT3HO75486 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.32■□□□□ 0.68
SUPT3HO75486 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SUPT3HO75486 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SUPT3HO75486 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SUPT3HO75486 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SUPT3HO75486 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 HCG11-201ENST00000411553 5696 ntBASIC19.31■□□□□ 0.68
SUPT3HO75486 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SUPT3HO75486 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.31■□□□□ 0.68
SUPT3HO75486 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.31■□□□□ 0.68
SUPT3HO75486 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.31■□□□□ 0.68
SUPT3HO75486 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.31■□□□□ 0.68
SUPT3HO75486 AL121832.2-201ENST00000610979 668 ntBASIC19.31■□□□□ 0.68
SUPT3HO75486 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SUPT3HO75486 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SUPT3HO75486 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
SUPT3HO75486 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.31■□□□□ 0.68
SUPT3HO75486 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.31■□□□□ 0.68
SUPT3HO75486 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SUPT3HO75486 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
SUPT3HO75486 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.3■□□□□ 0.68
SUPT3HO75486 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SUPT3HO75486 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SUPT3HO75486 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SUPT3HO75486 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SUPT3HO75486 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SUPT3HO75486 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
SUPT3HO75486 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SUPT3HO75486 MIPEPP3-201ENST00000412105 444 ntBASIC19.3■□□□□ 0.68
SUPT3HO75486 AL390719.1-204ENST00000412397 1219 ntBASIC19.3■□□□□ 0.68
SUPT3HO75486 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.3■□□□□ 0.68
SUPT3HO75486 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SUPT3HO75486 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.3■□□□□ 0.68
SUPT3HO75486 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.3■□□□□ 0.68
SUPT3HO75486 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.3■□□□□ 0.68
SUPT3HO75486 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.3■□□□□ 0.68
SUPT3HO75486 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.3■□□□□ 0.68
SUPT3HO75486 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SUPT3HO75486 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SUPT3HO75486 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SUPT3HO75486 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms