Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.88■■□□□ 1.25
CTNND1O60716 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CTNND1O60716 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.88■■□□□ 1.25
CTNND1O60716 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.88■■□□□ 1.25
CTNND1O60716 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CTNND1O60716 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
CTNND1O60716 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.88■■□□□ 1.25
CTNND1O60716 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.88■■□□□ 1.25
CTNND1O60716 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC22.88■■□□□ 1.25
CTNND1O60716 AC007663.1-201ENST00000438948 1240 ntBASIC22.88■■□□□ 1.25
CTNND1O60716 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.88■■□□□ 1.25
CTNND1O60716 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.88■■□□□ 1.25
CTNND1O60716 AC022616.7-201ENST00000525383 220 ntBASIC22.88■■□□□ 1.25
CTNND1O60716 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.88■■□□□ 1.25
CTNND1O60716 LINC01238-205ENST00000567549 1107 ntBASIC22.88■■□□□ 1.25
CTNND1O60716 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
CTNND1O60716 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.88■■□□□ 1.25
CTNND1O60716 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CTNND1O60716 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CTNND1O60716 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CTNND1O60716 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CTNND1O60716 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.87■■□□□ 1.25
CTNND1O60716 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CTNND1O60716 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.87■■□□□ 1.25
CTNND1O60716 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CTNND1O60716 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
CTNND1O60716 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
CTNND1O60716 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.87■■□□□ 1.25
CTNND1O60716 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CTNND1O60716 AC092338.2-201ENST00000568827 1415 ntBASIC22.87■■□□□ 1.25
CTNND1O60716 AP001271.2-201ENST00000624018 1556 ntBASIC22.87■■□□□ 1.25
CTNND1O60716 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.87■■□□□ 1.25
CTNND1O60716 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CTNND1O60716 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CTNND1O60716 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.86■■□□□ 1.25
CTNND1O60716 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC22.86■■□□□ 1.25
CTNND1O60716 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CTNND1O60716 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
CTNND1O60716 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CTNND1O60716 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CTNND1O60716 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.86■■□□□ 1.25
CTNND1O60716 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CTNND1O60716 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CTNND1O60716 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CTNND1O60716 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CTNND1O60716 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CTNND1O60716 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.86■■□□□ 1.25
CTNND1O60716 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.86■■□□□ 1.25
CTNND1O60716 AL160286.2-201ENST00000567150 934 ntBASIC22.86■■□□□ 1.25
CTNND1O60716 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.86■■□□□ 1.25
CTNND1O60716 AL023803.3-201ENST00000615559 522 ntBASIC22.86■■□□□ 1.25
CTNND1O60716 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CTNND1O60716 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.86■■□□□ 1.25
CTNND1O60716 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CTNND1O60716 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CTNND1O60716 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.85■■□□□ 1.25
CTNND1O60716 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
CTNND1O60716 AC139887.4-201ENST00000607877 719 ntBASIC22.85■■□□□ 1.25
CTNND1O60716 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC22.85■■□□□ 1.25
CTNND1O60716 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CTNND1O60716 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.85■■□□□ 1.25
CTNND1O60716 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CTNND1O60716 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CTNND1O60716 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CTNND1O60716 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CTNND1O60716 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.84■■□□□ 1.25
CTNND1O60716 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CTNND1O60716 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CTNND1O60716 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CTNND1O60716 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.84■■□□□ 1.25
CTNND1O60716 RNF152P1-201ENST00000397754 604 ntBASIC22.84■■□□□ 1.25
CTNND1O60716 FAM8A6P-201ENST00000407496 1135 ntBASIC22.84■■□□□ 1.25
CTNND1O60716 TSPY17P-201ENST00000450329 467 ntBASIC22.84■■□□□ 1.25
CTNND1O60716 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.84■■□□□ 1.25
CTNND1O60716 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.84■■□□□ 1.25
CTNND1O60716 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.84■■□□□ 1.25
CTNND1O60716 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.84■■□□□ 1.25
CTNND1O60716 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CTNND1O60716 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
CTNND1O60716 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CTNND1O60716 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CTNND1O60716 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.84■■□□□ 1.25
CTNND1O60716 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CTNND1O60716 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CTNND1O60716 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
CTNND1O60716 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms