Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.02■■□□□ 1.12
SORBS3O60504 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.02■■□□□ 1.12
SORBS3O60504 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SORBS3O60504 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
SORBS3O60504 AC004980.1-204ENST00000429707 299 ntBASIC22.02■■□□□ 1.12
SORBS3O60504 AL445675.2-201ENST00000620291 557 ntBASIC22.02■■□□□ 1.12
SORBS3O60504 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SORBS3O60504 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SORBS3O60504 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.02■■□□□ 1.12
SORBS3O60504 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22.02■■□□□ 1.12
SORBS3O60504 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
SORBS3O60504 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SORBS3O60504 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SORBS3O60504 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.01■■□□□ 1.11
SORBS3O60504 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.01■■□□□ 1.11
SORBS3O60504 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SORBS3O60504 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SORBS3O60504 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SORBS3O60504 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SORBS3O60504 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SORBS3O60504 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SORBS3O60504 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.01■■□□□ 1.11
SORBS3O60504 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SORBS3O60504 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.01■■□□□ 1.11
SORBS3O60504 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.01■■□□□ 1.11
SORBS3O60504 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.01■■□□□ 1.11
SORBS3O60504 HLA-A-209ENST00000638375 975 ntBASIC22.01■■□□□ 1.11
SORBS3O60504 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SORBS3O60504 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SORBS3O60504 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SORBS3O60504 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
SORBS3O60504 LINC01568-207ENST00000641790 1380 ntBASIC22■■□□□ 1.11
SORBS3O60504 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
SORBS3O60504 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SORBS3O60504 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SORBS3O60504 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SORBS3O60504 B3GAT3P1-201ENST00000471720 806 ntBASIC22■■□□□ 1.11
SORBS3O60504 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SORBS3O60504 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SORBS3O60504 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22■■□□□ 1.11
SORBS3O60504 AC010947.1-201ENST00000623454 693 ntBASIC22■■□□□ 1.11
SORBS3O60504 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22■■□□□ 1.11
SORBS3O60504 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22■■□□□ 1.11
SORBS3O60504 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22■■□□□ 1.11
SORBS3O60504 PCDHAC2-203ENST00000615316 3011 ntBASIC22■■□□□ 1.11
SORBS3O60504 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22■■□□□ 1.11
SORBS3O60504 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SORBS3O60504 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22■■□□□ 1.11
SORBS3O60504 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SORBS3O60504 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SORBS3O60504 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SORBS3O60504 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SORBS3O60504 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SORBS3O60504 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SORBS3O60504 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
SORBS3O60504 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SORBS3O60504 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SORBS3O60504 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.99■■□□□ 1.11
SORBS3O60504 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.99■■□□□ 1.11
SORBS3O60504 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SORBS3O60504 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
SORBS3O60504 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SORBS3O60504 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SORBS3O60504 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.99■■□□□ 1.11
SORBS3O60504 KRT18P57-201ENST00000443599 1254 ntBASIC21.99■■□□□ 1.11
SORBS3O60504 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.99■■□□□ 1.11
SORBS3O60504 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.99■■□□□ 1.11
SORBS3O60504 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SORBS3O60504 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SORBS3O60504 SLC25A24-204ENST00000569674 2357 ntBASIC21.99■■□□□ 1.11
SORBS3O60504 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SORBS3O60504 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.99■■□□□ 1.11
SORBS3O60504 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SORBS3O60504 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SORBS3O60504 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.99■■□□□ 1.11
SORBS3O60504 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.98■■□□□ 1.11
SORBS3O60504 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
SORBS3O60504 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SORBS3O60504 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.98■■□□□ 1.11
SORBS3O60504 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SORBS3O60504 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.98■■□□□ 1.11
SORBS3O60504 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SORBS3O60504 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SORBS3O60504 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.98■■□□□ 1.11
SORBS3O60504 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.98■■□□□ 1.11
SORBS3O60504 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SORBS3O60504 TMPOP1-202ENST00000424642 1267 ntBASIC21.98■■□□□ 1.11
SORBS3O60504 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SORBS3O60504 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.98■■□□□ 1.11
SORBS3O60504 AC008040.2-201ENST00000461049 708 ntBASIC21.98■■□□□ 1.11
SORBS3O60504 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SORBS3O60504 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SORBS3O60504 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.98■■□□□ 1.11
SORBS3O60504 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.98■■□□□ 1.11
SORBS3O60504 FITM1-202ENST00000559294 800 ntBASIC21.98■■□□□ 1.11
SORBS3O60504 NAPSB-206ENST00000562112 1266 ntBASIC21.98■■□□□ 1.11
SORBS3O60504 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.98■■□□□ 1.11
SORBS3O60504 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.98■■□□□ 1.11
SORBS3O60504 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.98■■□□□ 1.11
SORBS3O60504 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms