Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SSX4O60224 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.66■□□□□ 0.42
SSX4O60224 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX4O60224 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX4O60224 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX4O60224 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.66■□□□□ 0.42
SSX4O60224 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX4O60224 DUSP5P2-201ENST00000426873 1033 ntBASIC17.66■□□□□ 0.42
SSX4O60224 AC091874.3-201ENST00000512672 1195 ntBASIC17.66■□□□□ 0.42
SSX4O60224 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.66■□□□□ 0.42
SSX4O60224 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SSX4O60224 AC243732.1-201ENST00000612648 864 ntBASIC17.66■□□□□ 0.42
SSX4O60224 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SSX4O60224 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SSX4O60224 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX4O60224 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.66■□□□□ 0.42
SSX4O60224 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
SSX4O60224 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.66■□□□□ 0.42
SSX4O60224 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX4O60224 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX4O60224 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX4O60224 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.66■□□□□ 0.42
SSX4O60224 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX4O60224 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SSX4O60224 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSX4O60224 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSX4O60224 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSX4O60224 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.65■□□□□ 0.42
SSX4O60224 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.65■□□□□ 0.42
SSX4O60224 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.65■□□□□ 0.42
SSX4O60224 AL133373.2-201ENST00000623187 2828 ntBASIC17.65■□□□□ 0.42
SSX4O60224 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SSX4O60224 LSM12P1-201ENST00000411836 588 ntBASIC17.65■□□□□ 0.42
SSX4O60224 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SSX4O60224 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.65■□□□□ 0.42
SSX4O60224 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.65■□□□□ 0.42
SSX4O60224 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.65■□□□□ 0.42
SSX4O60224 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.65■□□□□ 0.42
SSX4O60224 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.65■□□□□ 0.42
SSX4O60224 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.65■□□□□ 0.42
SSX4O60224 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.65■□□□□ 0.42
SSX4O60224 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.65■□□□□ 0.42
SSX4O60224 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSX4O60224 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
SSX4O60224 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.64■□□□□ 0.41
SSX4O60224 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SSX4O60224 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SSX4O60224 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSX4O60224 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSX4O60224 PRORSD1P-201ENST00000295112 541 ntBASIC17.64■□□□□ 0.41
SSX4O60224 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSX4O60224 ESRRAP1-201ENST00000400596 1257 ntBASIC17.64■□□□□ 0.41
SSX4O60224 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.64■□□□□ 0.41
SSX4O60224 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.64■□□□□ 0.41
SSX4O60224 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.64■□□□□ 0.41
SSX4O60224 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.64■□□□□ 0.41
SSX4O60224 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSX4O60224 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.64■□□□□ 0.41
SSX4O60224 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.64■□□□□ 0.41
SSX4O60224 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.64■□□□□ 0.41
SSX4O60224 MYC-209ENST00000641252 345 ntBASIC17.64■□□□□ 0.41
SSX4O60224 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSX4O60224 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSX4O60224 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SSX4O60224 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSX4O60224 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SSX4O60224 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSX4O60224 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.64■□□□□ 0.41
SSX4O60224 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSX4O60224 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSX4O60224 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSX4O60224 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.63■□□□□ 0.41
SSX4O60224 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX4O60224 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX4O60224 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX4O60224 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX4O60224 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX4O60224 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX4O60224 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSX4O60224 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSX4O60224 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms