Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRICKLE3O43900 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRICKLE3O43900 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRICKLE3O43900 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.82■□□□□ 0.6
PRICKLE3O43900 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.82■□□□□ 0.6
PRICKLE3O43900 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRICKLE3O43900 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRICKLE3O43900 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRICKLE3O43900 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRICKLE3O43900 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 TREX1-205ENST00000625293 1783 ntBASIC18.81■□□□□ 0.6
PRICKLE3O43900 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRICKLE3O43900 SLC25A24-204ENST00000569674 2357 ntBASIC18.81■□□□□ 0.6
PRICKLE3O43900 AC012618.2-201ENST00000428058 849 ntBASIC18.81■□□□□ 0.6
PRICKLE3O43900 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 AF186192.3-201ENST00000583427 947 ntBASIC18.81■□□□□ 0.6
PRICKLE3O43900 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRICKLE3O43900 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRICKLE3O43900 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRICKLE3O43900 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRICKLE3O43900 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRICKLE3O43900 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRICKLE3O43900 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PRICKLE3O43900 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRICKLE3O43900 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRICKLE3O43900 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRICKLE3O43900 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRICKLE3O43900 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRICKLE3O43900 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRICKLE3O43900 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRICKLE3O43900 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.8■□□□□ 0.6
PRICKLE3O43900 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRICKLE3O43900 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRICKLE3O43900 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PRICKLE3O43900 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRICKLE3O43900 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRICKLE3O43900 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRICKLE3O43900 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRICKLE3O43900 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.8■□□□□ 0.6
PRICKLE3O43900 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.8■□□□□ 0.6
PRICKLE3O43900 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PRICKLE3O43900 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRICKLE3O43900 AL135905.2-201ENST00000584934 1404 ntBASIC18.8■□□□□ 0.6
PRICKLE3O43900 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRICKLE3O43900 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRICKLE3O43900 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRICKLE3O43900 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.8■□□□□ 0.6
PRICKLE3O43900 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.79■□□□□ 0.6
PRICKLE3O43900 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRICKLE3O43900 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRICKLE3O43900 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRICKLE3O43900 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PRICKLE3O43900 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRICKLE3O43900 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRICKLE3O43900 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRICKLE3O43900 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRICKLE3O43900 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRICKLE3O43900 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.79■□□□□ 0.6
PRICKLE3O43900 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.79■□□□□ 0.6
PRICKLE3O43900 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.79■□□□□ 0.6
PRICKLE3O43900 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRICKLE3O43900 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PRICKLE3O43900 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.79■□□□□ 0.6
PRICKLE3O43900 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE3O43900 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE3O43900 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE3O43900 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE3O43900 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE3O43900 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 NIFKP9-201ENST00000419265 221 ntBASIC18.78■□□□□ 0.6
PRICKLE3O43900 AL353807.1-201ENST00000427475 662 ntBASIC18.78■□□□□ 0.6
PRICKLE3O43900 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE3O43900 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.78■□□□□ 0.6
PRICKLE3O43900 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms