Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA2O43364 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HOXA2O43364 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.96■□□□□ 0.95
HOXA2O43364 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA2O43364 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
HOXA2O43364 AC007663.1-201ENST00000438948 1240 ntBASIC20.96■□□□□ 0.95
HOXA2O43364 CA15P1-201ENST00000481698 905 ntBASIC20.96■□□□□ 0.95
HOXA2O43364 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HOXA2O43364 AC022616.7-201ENST00000525383 220 ntBASIC20.96■□□□□ 0.95
HOXA2O43364 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXA2O43364 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXA2O43364 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA2O43364 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA2O43364 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA2O43364 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA2O43364 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA2O43364 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA2O43364 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXA2O43364 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXA2O43364 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXA2O43364 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
HOXA2O43364 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
HOXA2O43364 AC092338.2-201ENST00000568827 1415 ntBASIC20.95■□□□□ 0.95
HOXA2O43364 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HOXA2O43364 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
HOXA2O43364 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXA2O43364 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HOXA2O43364 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA2O43364 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA2O43364 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA2O43364 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA2O43364 AC063952.2-201ENST00000498792 1227 ntBASIC20.95■□□□□ 0.94
HOXA2O43364 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.95■□□□□ 0.94
HOXA2O43364 AL138966.2-201ENST00000621997 464 ntBASIC20.95■□□□□ 0.94
HOXA2O43364 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.95■□□□□ 0.94
HOXA2O43364 AC020907.5-201ENST00000624372 1936 ntBASIC20.95■□□□□ 0.94
HOXA2O43364 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA2O43364 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA2O43364 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA2O43364 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA2O43364 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HOXA2O43364 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HOXA2O43364 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HOXA2O43364 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA2O43364 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA2O43364 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA2O43364 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA2O43364 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA2O43364 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXA2O43364 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA2O43364 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA2O43364 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.94■□□□□ 0.94
HOXA2O43364 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.94■□□□□ 0.94
HOXA2O43364 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
HOXA2O43364 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA2O43364 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXA2O43364 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HOXA2O43364 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXA2O43364 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXA2O43364 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXA2O43364 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXA2O43364 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
HOXA2O43364 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA2O43364 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXA2O43364 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXA2O43364 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA2O43364 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HOXA2O43364 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA2O43364 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA2O43364 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.93■□□□□ 0.94
HOXA2O43364 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA2O43364 RNF152P1-201ENST00000397754 604 ntBASIC20.93■□□□□ 0.94
HOXA2O43364 AC117947.1-201ENST00000427448 529 ntBASIC20.93■□□□□ 0.94
HOXA2O43364 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.93■□□□□ 0.94
HOXA2O43364 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.93■□□□□ 0.94
HOXA2O43364 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.93■□□□□ 0.94
HOXA2O43364 AL023803.3-201ENST00000615559 522 ntBASIC20.93■□□□□ 0.94
HOXA2O43364 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA2O43364 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HOXA2O43364 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA2O43364 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HOXA2O43364 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA2O43364 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA2O43364 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HOXA2O43364 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA2O43364 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HOXA2O43364 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA2O43364 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA2O43364 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HOXA2O43364 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
HOXA2O43364 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA2O43364 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA2O43364 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA2O43364 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HOXA2O43364 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.92■□□□□ 0.94
HOXA2O43364 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.92■□□□□ 0.94
HOXA2O43364 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.92■□□□□ 0.94
HOXA2O43364 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.92■□□□□ 0.94
HOXA2O43364 AL353719.1-201ENST00000566847 864 ntBASIC20.92■□□□□ 0.94
HOXA2O43364 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms