Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.01■□□□□ 0.63
HDAC3O15379 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC3O15379 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.01■□□□□ 0.63
HDAC3O15379 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC3O15379 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
HDAC3O15379 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
HDAC3O15379 AC068338.2-201ENST00000563278 1430 ntBASIC19.01■□□□□ 0.63
HDAC3O15379 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC3O15379 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC3O15379 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC3O15379 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HDAC3O15379 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC3O15379 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.01■□□□□ 0.63
HDAC3O15379 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.01■□□□□ 0.63
HDAC3O15379 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.01■□□□□ 0.63
HDAC3O15379 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.01■□□□□ 0.63
HDAC3O15379 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC3O15379 AC141586.3-201ENST00000562166 1838 ntBASIC19.01■□□□□ 0.63
HDAC3O15379 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HDAC3O15379 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC3O15379 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.01■□□□□ 0.63
HDAC3O15379 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC3O15379 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC3O15379 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC3O15379 AC006333.2-201ENST00000607957 2099 ntBASIC19.01■□□□□ 0.63
HDAC3O15379 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HDAC3O15379 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 AL049812.1-201ENST00000432563 2267 ntBASIC19■□□□□ 0.63
HDAC3O15379 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19■□□□□ 0.63
HDAC3O15379 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HDAC3O15379 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HDAC3O15379 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HDAC3O15379 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19■□□□□ 0.63
HDAC3O15379 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19■□□□□ 0.63
HDAC3O15379 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19■□□□□ 0.63
HDAC3O15379 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19■□□□□ 0.63
HDAC3O15379 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HDAC3O15379 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19■□□□□ 0.63
HDAC3O15379 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
HDAC3O15379 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HDAC3O15379 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19■□□□□ 0.63
HDAC3O15379 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19■□□□□ 0.63
HDAC3O15379 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19■□□□□ 0.63
HDAC3O15379 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19■□□□□ 0.63
HDAC3O15379 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HDAC3O15379 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
HDAC3O15379 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HDAC3O15379 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
HDAC3O15379 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.99■□□□□ 0.63
HDAC3O15379 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.99■□□□□ 0.63
HDAC3O15379 TEX21P-204ENST00000641479 1693 ntBASIC18.99■□□□□ 0.63
HDAC3O15379 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HDAC3O15379 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.99■□□□□ 0.63
HDAC3O15379 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HDAC3O15379 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.99■□□□□ 0.63
HDAC3O15379 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HDAC3O15379 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
HDAC3O15379 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC3O15379 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HDAC3O15379 AC018553.1-201ENST00000616682 1458 ntBASIC18.98■□□□□ 0.63
HDAC3O15379 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC3O15379 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC3O15379 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC3O15379 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC3O15379 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.98■□□□□ 0.63
HDAC3O15379 CNN2P6-201ENST00000439038 900 ntBASIC18.98■□□□□ 0.63
HDAC3O15379 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC3O15379 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.98■□□□□ 0.63
HDAC3O15379 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.98■□□□□ 0.63
HDAC3O15379 C2orf69P4-201ENST00000565394 541 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms