Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.58■■□□□ 1.37
SEMA3EO15041 FAM207BP-201ENST00000447172 505 ntBASIC23.58■■□□□ 1.37
SEMA3EO15041 AC091390.4-202ENST00000476426 537 ntBASIC23.58■■□□□ 1.37
SEMA3EO15041 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.58■■□□□ 1.37
SEMA3EO15041 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
SEMA3EO15041 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
SEMA3EO15041 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SEMA3EO15041 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.58■■□□□ 1.36
SEMA3EO15041 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SEMA3EO15041 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SEMA3EO15041 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.36
SEMA3EO15041 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SEMA3EO15041 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.58■■□□□ 1.36
SEMA3EO15041 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SEMA3EO15041 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SEMA3EO15041 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
SEMA3EO15041 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
SEMA3EO15041 TSPY14P-201ENST00000303979 915 ntBASIC23.57■■□□□ 1.36
SEMA3EO15041 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.57■■□□□ 1.36
SEMA3EO15041 CRYGFP-201ENST00000418459 633 ntBASIC23.57■■□□□ 1.36
SEMA3EO15041 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SEMA3EO15041 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.57■■□□□ 1.36
SEMA3EO15041 EGLN1P1-201ENST00000531623 762 ntBASIC23.57■■□□□ 1.36
SEMA3EO15041 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.57■■□□□ 1.36
SEMA3EO15041 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.57■■□□□ 1.36
SEMA3EO15041 P4HB-223ENST00000576390 439 ntTSL 4 BASIC23.57■■□□□ 1.36
SEMA3EO15041 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.57■■□□□ 1.36
SEMA3EO15041 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
SEMA3EO15041 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
SEMA3EO15041 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SEMA3EO15041 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.57■■□□□ 1.36
SEMA3EO15041 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SEMA3EO15041 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SEMA3EO15041 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
SEMA3EO15041 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.56■■□□□ 1.36
SEMA3EO15041 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
SEMA3EO15041 AL391422.3-201ENST00000603791 2761 ntBASIC23.56■■□□□ 1.36
SEMA3EO15041 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
SEMA3EO15041 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.56■■□□□ 1.36
SEMA3EO15041 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.56■■□□□ 1.36
SEMA3EO15041 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SEMA3EO15041 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.56■■□□□ 1.36
SEMA3EO15041 SLC25A1P4-201ENST00000567977 778 ntBASIC23.56■■□□□ 1.36
SEMA3EO15041 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
SEMA3EO15041 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
SEMA3EO15041 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SEMA3EO15041 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SEMA3EO15041 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SEMA3EO15041 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SEMA3EO15041 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.56■■□□□ 1.36
SEMA3EO15041 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SEMA3EO15041 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SEMA3EO15041 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
SEMA3EO15041 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.56■■□□□ 1.36
SEMA3EO15041 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
SEMA3EO15041 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SEMA3EO15041 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.55■■□□□ 1.36
SEMA3EO15041 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SEMA3EO15041 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SEMA3EO15041 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.55■■□□□ 1.36
SEMA3EO15041 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SEMA3EO15041 AC113347.1-201ENST00000413321 391 ntBASIC23.55■■□□□ 1.36
SEMA3EO15041 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.55■■□□□ 1.36
SEMA3EO15041 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.55■■□□□ 1.36
SEMA3EO15041 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.55■■□□□ 1.36
SEMA3EO15041 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SEMA3EO15041 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SEMA3EO15041 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SEMA3EO15041 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.55■■□□□ 1.36
SEMA3EO15041 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.55■■□□□ 1.36
SEMA3EO15041 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SEMA3EO15041 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SEMA3EO15041 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SEMA3EO15041 TCF3P1-201ENST00000423021 1937 ntBASIC23.55■■□□□ 1.36
SEMA3EO15041 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SEMA3EO15041 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.55■■□□□ 1.36
SEMA3EO15041 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SEMA3EO15041 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.55■■□□□ 1.36
SEMA3EO15041 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SEMA3EO15041 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SEMA3EO15041 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.54■■□□□ 1.36
SEMA3EO15041 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SEMA3EO15041 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
SEMA3EO15041 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SEMA3EO15041 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.54■■□□□ 1.36
SEMA3EO15041 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.54■■□□□ 1.36
SEMA3EO15041 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.54■■□□□ 1.36
SEMA3EO15041 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.54■■□□□ 1.36
SEMA3EO15041 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.54■■□□□ 1.36
SEMA3EO15041 AC092865.7-201ENST00000641832 219 ntBASIC23.54■■□□□ 1.36
SEMA3EO15041 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SEMA3EO15041 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.54■■□□□ 1.36
SEMA3EO15041 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SEMA3EO15041 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SEMA3EO15041 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SEMA3EO15041 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SEMA3EO15041 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SEMA3EO15041 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SEMA3EO15041 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
SEMA3EO15041 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms