Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
O00370 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.85■□□□□ 0.93
O00370 PRORSD1P-201ENST00000295112 541 ntBASIC20.85■□□□□ 0.93
O00370 KRT18P29-201ENST00000397031 1267 ntBASIC20.85■□□□□ 0.93
O00370 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.85■□□□□ 0.93
O00370 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
O00370 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.85■□□□□ 0.93
O00370 PRKY-204ENST00000533551 1019 ntBASIC20.85■□□□□ 0.93
O00370 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.85■□□□□ 0.93
O00370 AL023875.1-201ENST00000640777 796 ntBASIC20.85■□□□□ 0.93
O00370 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
O00370 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
O00370 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.85■□□□□ 0.93
O00370 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
O00370 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
O00370 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
O00370 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
O00370 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
O00370 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
O00370 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
O00370 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.84■□□□□ 0.93
O00370 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
O00370 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
O00370 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
O00370 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.84■□□□□ 0.93
O00370 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.84■□□□□ 0.93
O00370 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
O00370 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.84■□□□□ 0.93
O00370 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
O00370 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
O00370 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
O00370 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
O00370 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
O00370 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.84■□□□□ 0.93
O00370 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
O00370 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
O00370 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
O00370 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
O00370 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
O00370 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.83■□□□□ 0.93
O00370 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
O00370 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
O00370 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
O00370 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.83■□□□□ 0.93
O00370 YBX1P10-201ENST00000444752 975 ntBASIC20.83■□□□□ 0.93
O00370 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.83■□□□□ 0.93
O00370 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.83■□□□□ 0.93
O00370 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.83■□□□□ 0.93
O00370 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.83■□□□□ 0.93
O00370 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
O00370 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
O00370 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
O00370 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
O00370 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
O00370 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.83■□□□□ 0.92
O00370 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.83■□□□□ 0.92
O00370 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
O00370 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
O00370 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
O00370 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
O00370 TREX1-205ENST00000625293 1783 ntBASIC20.82■□□□□ 0.92
O00370 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
O00370 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.82■□□□□ 0.92
O00370 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
O00370 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.82■□□□□ 0.92
O00370 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.82■□□□□ 0.92
O00370 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
O00370 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
O00370 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
O00370 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
O00370 AC239809.2-201ENST00000415381 517 ntBASIC20.82■□□□□ 0.92
O00370 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.82■□□□□ 0.92
O00370 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.82■□□□□ 0.92
O00370 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
O00370 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.82■□□□□ 0.92
O00370 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
O00370 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.82■□□□□ 0.92
O00370 AC124016.1-201ENST00000609552 612 ntBASIC20.82■□□□□ 0.92
O00370 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
O00370 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
O00370 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.82■□□□□ 0.92
O00370 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
O00370 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.82■□□□□ 0.92
O00370 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
O00370 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
O00370 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
O00370 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
O00370 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
O00370 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.81■□□□□ 0.92
O00370 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
O00370 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.81■□□□□ 0.92
O00370 AC087289.5-201ENST00000586076 3175 ntBASIC20.81■□□□□ 0.92
O00370 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
O00370 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
O00370 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
O00370 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
O00370 KRASP1-201ENST00000407852 552 ntBASIC20.81■□□□□ 0.92
O00370 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.81■□□□□ 0.92
O00370 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
O00370 AC133681.1-201ENST00000465482 601 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms