Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.6■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.6■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.6■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.6■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 MESTP1-201ENST00000404287 994 ntBASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 NAPSB-206ENST00000562112 1266 ntBASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 AC012306.2-201ENST00000609350 630 ntBASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.58■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
C1QTNF3-AMACRE9PGA6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AL390955.1-201ENST00000428694 934 ntBASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC011506.1-201ENST00000474329 610 ntBASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC092667.1-201ENST00000434301 2586 ntBASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AL391422.3-201ENST00000603791 2761 ntBASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC004951.3-201ENST00000418645 1148 ntBASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 FAM210CP-201ENST00000445714 574 ntBASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC011298.2-201ENST00000617989 482 ntBASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 RCC2P6-201ENST00000526625 1557 ntBASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AP005242.2-201ENST00000580065 1175 ntBASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC145285.6-201ENST00000604632 637 ntBASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms