Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.48■□□□□ 0.71
CFAP99D6REC4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
CFAP99D6REC4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.48■□□□□ 0.71
CFAP99D6REC4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.48■□□□□ 0.71
CFAP99D6REC4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP99D6REC4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP99D6REC4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP99D6REC4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP99D6REC4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP99D6REC4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP99D6REC4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CFAP99D6REC4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 KRT18P29-201ENST00000397031 1267 ntBASIC19.47■□□□□ 0.71
CFAP99D6REC4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 MTDHP1-201ENST00000605323 784 ntBASIC19.47■□□□□ 0.71
CFAP99D6REC4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CFAP99D6REC4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CFAP99D6REC4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CFAP99D6REC4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP99D6REC4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CFAP99D6REC4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP99D6REC4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CFAP99D6REC4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP99D6REC4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP99D6REC4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP99D6REC4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP99D6REC4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.46■□□□□ 0.71
CFAP99D6REC4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.46■□□□□ 0.71
CFAP99D6REC4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.46■□□□□ 0.71
CFAP99D6REC4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.46■□□□□ 0.71
CFAP99D6REC4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.46■□□□□ 0.71
CFAP99D6REC4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CFAP99D6REC4 ITM2C-210ENST00000620962 501 ntBASIC19.46■□□□□ 0.71
CFAP99D6REC4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.46■□□□□ 0.71
CFAP99D6REC4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP99D6REC4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CFAP99D6REC4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP99D6REC4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.46■□□□□ 0.71
CFAP99D6REC4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP99D6REC4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CFAP99D6REC4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.46■□□□□ 0.71
CFAP99D6REC4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP99D6REC4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP99D6REC4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP99D6REC4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
CFAP99D6REC4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CFAP99D6REC4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP99D6REC4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP99D6REC4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP99D6REC4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP99D6REC4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP99D6REC4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP99D6REC4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.45■□□□□ 0.7
CFAP99D6REC4 AC239809.2-201ENST00000415381 517 ntBASIC19.45■□□□□ 0.7
CFAP99D6REC4 YBX1P10-201ENST00000444752 975 ntBASIC19.45■□□□□ 0.7
CFAP99D6REC4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.45■□□□□ 0.7
CFAP99D6REC4 AC233263.1-201ENST00000578059 224 ntBASIC19.45■□□□□ 0.7
CFAP99D6REC4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP99D6REC4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP99D6REC4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP99D6REC4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CFAP99D6REC4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CFAP99D6REC4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CFAP99D6REC4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP99D6REC4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.44■□□□□ 0.7
CFAP99D6REC4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP99D6REC4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP99D6REC4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CFAP99D6REC4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.44■□□□□ 0.7
CFAP99D6REC4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms