Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RCCD1A6NED2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RCCD1A6NED2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RCCD1A6NED2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RCCD1A6NED2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RCCD1A6NED2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RCCD1A6NED2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.81■□□□□ 0.92
RCCD1A6NED2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RCCD1A6NED2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RCCD1A6NED2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RCCD1A6NED2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RCCD1A6NED2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RCCD1A6NED2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RCCD1A6NED2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RCCD1A6NED2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.8■□□□□ 0.92
RCCD1A6NED2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RCCD1A6NED2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RCCD1A6NED2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RCCD1A6NED2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.8■□□□□ 0.92
RCCD1A6NED2 AC016769.1-201ENST00000409132 1010 ntBASIC20.8■□□□□ 0.92
RCCD1A6NED2 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.8■□□□□ 0.92
RCCD1A6NED2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.8■□□□□ 0.92
RCCD1A6NED2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.8■□□□□ 0.92
RCCD1A6NED2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.8■□□□□ 0.92
RCCD1A6NED2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RCCD1A6NED2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RCCD1A6NED2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RCCD1A6NED2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.79■□□□□ 0.92
RCCD1A6NED2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RCCD1A6NED2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RCCD1A6NED2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RCCD1A6NED2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RCCD1A6NED2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RCCD1A6NED2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RCCD1A6NED2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RCCD1A6NED2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.79■□□□□ 0.92
RCCD1A6NED2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.79■□□□□ 0.92
RCCD1A6NED2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.79■□□□□ 0.92
RCCD1A6NED2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.79■□□□□ 0.92
RCCD1A6NED2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.79■□□□□ 0.92
RCCD1A6NED2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.79■□□□□ 0.92
RCCD1A6NED2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.79■□□□□ 0.92
RCCD1A6NED2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RCCD1A6NED2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RCCD1A6NED2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RCCD1A6NED2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
RCCD1A6NED2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RCCD1A6NED2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RCCD1A6NED2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RCCD1A6NED2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RCCD1A6NED2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RCCD1A6NED2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RCCD1A6NED2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RCCD1A6NED2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RCCD1A6NED2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RCCD1A6NED2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RCCD1A6NED2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RCCD1A6NED2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RCCD1A6NED2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.78■□□□□ 0.92
RCCD1A6NED2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RCCD1A6NED2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.78■□□□□ 0.92
RCCD1A6NED2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RCCD1A6NED2 OR10C1-204ENST00000622521 1039 ntBASIC20.78■□□□□ 0.92
RCCD1A6NED2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RCCD1A6NED2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RCCD1A6NED2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
RCCD1A6NED2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.78■□□□□ 0.92
RCCD1A6NED2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RCCD1A6NED2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RCCD1A6NED2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RCCD1A6NED2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RCCD1A6NED2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RCCD1A6NED2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RCCD1A6NED2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.77■□□□□ 0.92
RCCD1A6NED2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RCCD1A6NED2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
RCCD1A6NED2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RCCD1A6NED2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RCCD1A6NED2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RCCD1A6NED2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.77■□□□□ 0.92
RCCD1A6NED2 GPX1P1-201ENST00000388829 606 ntBASIC20.77■□□□□ 0.92
RCCD1A6NED2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.77■□□□□ 0.92
RCCD1A6NED2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.77■□□□□ 0.92
RCCD1A6NED2 AC008694.1-202ENST00000636953 945 ntBASIC20.77■□□□□ 0.92
RCCD1A6NED2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
RCCD1A6NED2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RCCD1A6NED2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RCCD1A6NED2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RCCD1A6NED2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RCCD1A6NED2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RCCD1A6NED2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms