Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 KRT17P1-201ENST00000399211 1546 ntBASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 AL390719.1-204ENST00000412397 1219 ntBASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV30A0A087WSZ9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 AC005332.7-201ENST00000614046 2005 ntBASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 MKRN4P-201ENST00000444706 1521 ntBASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 AC093787.1-201ENST00000450396 207 ntBASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 AF201337.1-201ENST00000520239 748 ntBASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV30A0A087WSZ9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.33■□□□□ 0.05
TRAV30A0A087WSZ9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV30A0A087WSZ9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV30A0A087WSZ9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 AC080038.1-201ENST00000611274 1154 ntBASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 AC093484.2-201ENST00000580996 2166 ntBASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV30A0A087WSZ9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 GPX1P1-201ENST00000388829 606 ntBASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 AC120498.9-201ENST00000339021 3867 ntBASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV30A0A087WSZ9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms