Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF11Q9Y3C5 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF11Q9Y3C5 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF11Q9Y3C5 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
RNF11Q9Y3C5 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF11Q9Y3C5 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF11Q9Y3C5 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF11Q9Y3C5 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF11Q9Y3C5 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNF11Q9Y3C5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RNF11Q9Y3C5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.84□□□□□ -1.64
RNF11Q9Y3C5 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
RNF11Q9Y3C5 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF11Q9Y3C5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF11Q9Y3C5 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 AC079355.1-201ENST00000421770 223 ntBASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 RPL34P20-201ENST00000442771 351 ntBASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 KNOP1P3-201ENST00000446933 426 ntBASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 AC097484.1-201ENST00000471148 389 ntBASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 COPS8P2-201ENST00000473228 627 ntBASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 RNA5SP249-201ENST00000516127 99 ntBASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 IMMP1LP1-201ENST00000605170 488 ntBASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 AC018690.1-201ENST00000608144 626 ntBASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 MIR4302-201ENST00000638058 60 ntBASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 PABPC1P6-201ENST00000445594 1829 ntBASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF11Q9Y3C5 AC097461.1-201ENST00000568928 2821 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 OR51C1P-202ENST00000641159 1444 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 SNORA73.1-201ENST00000363107 205 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 RNA5SP435-201ENST00000364044 108 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AC092447.2-201ENST00000435487 669 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AL354714.3-201ENST00000447284 493 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 RN7SL172P-201ENST00000460535 303 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 RN7SL222P-201ENST00000476452 299 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 RPS18P6-201ENST00000476880 458 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AC079841.1-201ENST00000481228 950 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 HMGN2P25-201ENST00000486956 268 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AC073358.1-201ENST00000505671 684 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 MIR4489-201ENST00000578869 62 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 MIR3176-201ENST00000582210 90 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 SNORD91B-202ENST00000608459 222 ntBASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF11Q9Y3C5 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms