Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RN7SKP99-201ENST00000517028 307 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC109635.6-201ENST00000525487 1113 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 RN7SL708P-201ENST00000580952 299 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC060766.1-201ENST00000590824 627 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC091167.5-201ENST00000605689 894 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AL356274.1-201ENST00000617064 410 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC015914.2-201ENST00000618167 288 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC129778.1-202ENST00000623812 261 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AC021106.3-201ENST00000623925 531 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AP001052.1-201ENST00000626421 99 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AL591379.1-207ENST00000635982 261 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 OR51C1P-202ENST00000641159 1444 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 NXF4-202ENST00000416098 1465 ntBASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.36□□□□□ -1.71
KCNIP3Q9Y2W7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 OR8V1P-201ENST00000395193 873 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 MIR1203-201ENST00000408812 85 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AL359885.1-201ENST00000415786 903 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 GLUD1P9-201ENST00000420997 1173 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 NPM1P26-201ENST00000426339 738 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 UBE2V2P3-201ENST00000433562 437 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC005297.1-201ENST00000444765 862 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 NOP56P2-201ENST00000447491 769 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC069277.2-201ENST00000454211 432 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC093166.2-201ENST00000455969 1017 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 RPL7AP28-201ENST00000464513 571 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 MTND3P6-201ENST00000485242 339 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 RPL29P23-201ENST00000486188 442 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 RN7SL423P-201ENST00000486202 304 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 LSM3P4-201ENST00000502948 309 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 HMGB3P13-201ENST00000511263 607 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 RNA5SP96-201ENST00000516041 107 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC121758.1-202ENST00000556917 658 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 MRPS21P7-201ENST00000566937 238 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 PPATP2-201ENST00000605635 508 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC105105.5-201ENST00000622635 1294 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 AC008691.1-209ENST00000642094 814 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 HSPA8P17-201ENST00000427029 1382 ntBASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
KCNIP3Q9Y2W7 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms