Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 AC096576.1-201ENST00000489014 359 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 AL117692.1-201ENST00000494283 713 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 AC093278.1-201ENST00000494700 600 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 RNA5SP287-201ENST00000516358 103 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 IGKV3D-31-201ENST00000519131 281 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 AC008562.1-201ENST00000521763 330 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 PHBP17-201ENST00000528576 541 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 AC090236.2-201ENST00000587933 1101 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 BCRP9-201ENST00000605312 388 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 U47924.1-201ENST00000606539 434 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 MIR98-201ENST00000606724 119 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 AC068722.2-201ENST00000618734 544 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 RN7SL680P-201ENST00000620379 299 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 AC007603.3-201ENST00000636915 979 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 AC093225.1-201ENST00000506867 1408 ntBASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LIMD1Q9UGP4 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AL512646.1-201ENST00000269395 1077 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 OR52B1P-201ENST00000316506 909 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AL121972.1-201ENST00000402023 252 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 COX6A1P3-201ENST00000404167 293 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 RNU2-28P-201ENST00000410457 189 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AL359704.1-201ENST00000411586 781 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 MTCO3P12-201ENST00000416718 547 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 OR51AB1P-201ENST00000429046 620 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AL138899.2-201ENST00000439139 499 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 SRP68P2-201ENST00000456184 254 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AC079193.1-201ENST00000460497 588 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AC063943.1-201ENST00000465434 453 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AC007537.2-201ENST00000472093 511 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AC096741.1-201ENST00000472250 846 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AC083798.1-201ENST00000472671 131 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 RPL12P31-201ENST00000478433 450 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 RPL17P2-201ENST00000491913 451 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AC024405.1-201ENST00000532521 1042 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AC243960.4-201ENST00000600532 288 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 RMST_3.1-201ENST00000611651 109 ntBASIC7.74□□□□□ -1.17
LIMD1Q9UGP4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms