Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC236972.2-201ENST00000434979 310 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 CYCSP11-201ENST00000436426 315 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC016691.1-201ENST00000441321 413 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 RPS7P4-201ENST00000444127 582 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC010878.1-201ENST00000456500 1047 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 TREML3P-201ENST00000457327 501 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 RPL7P48-201ENST00000461513 746 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC096741.1-201ENST00000472250 846 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 RPS10P28-201ENST00000480396 498 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC093278.1-201ENST00000494700 600 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 RN7SKP13-201ENST00000515933 244 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC110588.1-201ENST00000559699 137 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC093249.1-201ENST00000567049 203 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 MIR1273F-201ENST00000580581 99 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AL162413.1-201ENST00000603198 110 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC006335.3-201ENST00000613408 292 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 SNORA43.5-201ENST00000631270 138 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC233280.20-201ENST00000637412 416 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC119674.1-207ENST00000641355 633 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 AL034417.4-202ENST00000642135 2236 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 SALL4P7-201ENST00000555779 3120 ntBASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CUEDC1Q9NWM3 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AL031651.1-201ENST00000615357 1438 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AL133243.4-201ENST00000623116 3109 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 TMCC1P1-201ENST00000518897 1980 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 VPS35P1-201ENST00000563400 1518 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 RN7SKP211-201ENST00000363328 315 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 Y_RNA.409-201ENST00000383990 98 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 Y_RNA.481-201ENST00000384373 102 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AL451061.1-201ENST00000407887 862 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 RN7SKP222-201ENST00000410651 315 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 RNU6-575P-201ENST00000411326 105 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 RN7SKP30-201ENST00000411373 334 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 OR1AA1P-201ENST00000419597 916 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AL356583.2-201ENST00000426536 280 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 YWHAEP5-201ENST00000431545 765 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AL451074.4-201ENST00000447545 470 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC013429.1-201ENST00000456604 422 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 MTCO2P29-201ENST00000465212 189 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 RN7SL751P-201ENST00000473281 284 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC009153.1-201ENST00000485799 496 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 RPL35P6-201ENST00000490024 372 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC093809.1-201ENST00000509155 340 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 NXPE2P1-201ENST00000543705 726 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 HIF1AP1-201ENST00000553642 175 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AL049869.4-201ENST00000555669 178 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC004817.2-201ENST00000561794 651 ntBASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.19□□□□□ -1.26
CUEDC1Q9NWM3 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms