Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CISHQ9NSE2 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.25□□□□□ -1.57
CISHQ9NSE2 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.25□□□□□ -1.57
CISHQ9NSE2 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CISHQ9NSE2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CISHQ9NSE2 AC009643.2-201ENST00000603543 1448 ntBASIC5.24□□□□□ -1.57
CISHQ9NSE2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CISHQ9NSE2 AP000473.2-201ENST00000602659 1537 ntBASIC5.24□□□□□ -1.57
CISHQ9NSE2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CISHQ9NSE2 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CISHQ9NSE2 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CISHQ9NSE2 OR2AM1P-201ENST00000422137 422 ntBASIC5.24□□□□□ -1.57
CISHQ9NSE2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 PRPF38AP2-201ENST00000438179 851 ntBASIC5.24□□□□□ -1.57
CISHQ9NSE2 AC112498.1-201ENST00000444401 332 ntBASIC5.24□□□□□ -1.57
CISHQ9NSE2 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 AC116562.1-201ENST00000485355 781 ntBASIC5.24□□□□□ -1.57
CISHQ9NSE2 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 BTF3P13-201ENST00000513224 490 ntBASIC5.24□□□□□ -1.57
CISHQ9NSE2 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 AL049830.4-201ENST00000555149 351 ntBASIC5.24□□□□□ -1.57
CISHQ9NSE2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 MIR4646-201ENST00000580775 63 ntBASIC5.24□□□□□ -1.57
CISHQ9NSE2 Z95327.3-201ENST00000610385 572 ntBASIC5.24□□□□□ -1.57
CISHQ9NSE2 AC243960.7-201ENST00000623532 707 ntBASIC5.24□□□□□ -1.57
CISHQ9NSE2 AC008758.3-201ENST00000507003 1829 ntBASIC5.24□□□□□ -1.57
CISHQ9NSE2 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.24□□□□□ -1.57
CISHQ9NSE2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CISHQ9NSE2 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CISHQ9NSE2 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.23□□□□□ -1.57
CISHQ9NSE2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CISHQ9NSE2 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
CISHQ9NSE2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.23□□□□□ -1.57
CISHQ9NSE2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CISHQ9NSE2 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CISHQ9NSE2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CISHQ9NSE2 SNORA51.8-201ENST00000384234 132 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 HMGB3P7-201ENST00000400214 611 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 RNA5SP345-201ENST00000410646 108 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CISHQ9NSE2 HMGN2P27-201ENST00000427352 270 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 AC092162.1-201ENST00000432828 434 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.23□□□□□ -1.57
CISHQ9NSE2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.23□□□□□ -1.57
CISHQ9NSE2 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.23□□□□□ -1.57
CISHQ9NSE2 AC093270.2-201ENST00000486157 792 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 RPL32P9-201ENST00000487963 407 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 COX6B1P2-201ENST00000489624 230 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CISHQ9NSE2 ENPP7P9-201ENST00000514456 627 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CISHQ9NSE2 EIF4A2P5-201ENST00000529914 499 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.23□□□□□ -1.57
CISHQ9NSE2 AC011487.3-201ENST00000593607 453 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.23□□□□□ -1.57
CISHQ9NSE2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.23□□□□□ -1.57
CISHQ9NSE2 AC010424.2-201ENST00000607594 443 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 AL021707.7-201ENST00000607991 416 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 AL022401.1-201ENST00000619498 108 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CISHQ9NSE2 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CISHQ9NSE2 IRF5P1-201ENST00000504852 2164 ntBASIC5.23□□□□□ -1.57
CISHQ9NSE2 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CISHQ9NSE2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CISHQ9NSE2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CISHQ9NSE2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CISHQ9NSE2 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CISHQ9NSE2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CISHQ9NSE2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CISHQ9NSE2 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CISHQ9NSE2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 AL449283.1-201ENST00000602631 3403 ntBASIC5.22□□□□□ -1.57
CISHQ9NSE2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CISHQ9NSE2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CISHQ9NSE2 AL645733.1-201ENST00000402250 217 ntBASIC5.22□□□□□ -1.57
CISHQ9NSE2 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 RPL12P43-201ENST00000420608 499 ntBASIC5.22□□□□□ -1.57
CISHQ9NSE2 SETP9-201ENST00000423837 832 ntBASIC5.22□□□□□ -1.57
CISHQ9NSE2 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 SUMO2P1-206ENST00000445436 284 ntBASIC5.22□□□□□ -1.57
CISHQ9NSE2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.22□□□□□ -1.57
CISHQ9NSE2 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms