Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 AC018695.5-201ENST00000605872 315 ntBASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 AL353600.1-201ENST00000608148 251 ntBASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 OR7M1P-201ENST00000608946 533 ntBASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 WBP1LP8-201ENST00000617401 327 ntBASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 AC135068.12-201ENST00000637370 931 ntBASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.38□□□□□ -1.55
CCDC50Q8IVM0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 Z95327.2-201ENST00000414579 1873 ntBASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 RPL35AP21-201ENST00000437667 333 ntBASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 PCNPP2-201ENST00000441651 455 ntBASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 RPL5P16-201ENST00000471467 790 ntBASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 RN7SL717P-201ENST00000478343 297 ntBASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 RN7SL184P-201ENST00000488308 297 ntBASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 GTF2F2P1-201ENST00000511083 675 ntBASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AC109309.2-201ENST00000612597 332 ntBASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AL359513.1-201ENST00000614364 557 ntBASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AC108359.1-201ENST00000616451 1211 ntBASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AC026124.2-201ENST00000621847 656 ntBASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC50Q8IVM0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 U3.3-201ENST00000362986 216 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 SNORA67-201ENST00000384423 137 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 U3.32-201ENST00000408116 212 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 SNORA11.5-201ENST00000408163 128 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 RN7SKP59-201ENST00000410520 314 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 EIF4A1P1-201ENST00000420241 934 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 GAPDHP34-201ENST00000432112 823 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 AC007386.1-201ENST00000455212 582 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 AC093166.2-201ENST00000455969 1017 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 SETP20-201ENST00000457046 852 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 RPS27AP2-201ENST00000457576 465 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 RPSAP39-201ENST00000467439 883 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 AC126177.5-201ENST00000549599 178 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 AC020978.7-201ENST00000575953 1187 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 AL589674.2-201ENST00000604304 337 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 AL137246.1-201ENST00000607072 977 ntBASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC50Q8IVM0 AC139713.2-215ENST00000641428 5037 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms