Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC58Q4VC31 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 MIR133B-201ENST00000362210 119 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 RNA5SP90-201ENST00000364801 99 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 RNA5SP122-201ENST00000384457 108 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 MIR105-1-201ENST00000385222 81 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 EEF1B2P8-201ENST00000414101 671 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 OR51A6P-201ENST00000418680 1004 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AC092570.3-201ENST00000420113 693 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 CDY8P-201ENST00000428380 1279 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AC110602.1-201ENST00000437414 318 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 EEF1B2P6-201ENST00000445713 673 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 CDY20P-201ENST00000447528 1279 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AL121877.1-201ENST00000453704 622 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AL356981.1-201ENST00000454879 684 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AC138866.2-201ENST00000508650 584 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 ENPP7P9-201ENST00000514456 627 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AC011853.1-201ENST00000518911 454 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 HMGB1P40-201ENST00000525121 540 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AL512310.9-201ENST00000553311 948 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AP002884.5-201ENST00000595053 1132 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 IMMP1LP3-201ENST00000604197 224 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 BNIP3P35-201ENST00000604530 490 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 CASC19-222ENST00000641321 1173 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AC107027.3-201ENST00000565095 3473 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AL133268.1-201ENST00000405676 1401 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCDC58Q4VC31 AC092747.4-201ENST00000620519 1861 ntBASIC4.54□□□□□ -1.68
CCDC58Q4VC31 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AL445487.1-201ENST00000415694 1580 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AL139039.2-201ENST00000407436 479 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 TMBIM7P-201ENST00000418074 855 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 TNPO1P1-201ENST00000423641 1138 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 DSTNP5-201ENST00000427921 523 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 RPS29P10-201ENST00000439197 166 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 HLA-DPA3-207ENST00000454398 229 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC093166.2-201ENST00000455969 1017 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 CTSLP6-201ENST00000458273 1002 ntBASIC4.53□□□□□ -1.68
CCDC58Q4VC31 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC58Q4VC31 AC090686.1-201ENST00000481577 749 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms