Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PSMA2P2-201ENST00000504319 686 ntBASIC3.4□□□□□ -1.87
RPL39P62891 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RPL39P62891 RNU6-709P-201ENST00000517257 104 ntBASIC3.4□□□□□ -1.87
RPL39P62891 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.4□□□□□ -1.87
RPL39P62891 BCAS2P1-201ENST00000528022 632 ntBASIC3.4□□□□□ -1.87
RPL39P62891 AC024940.3-201ENST00000538551 316 ntBASIC3.4□□□□□ -1.87
RPL39P62891 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.4□□□□□ -1.87
RPL39P62891 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC3.4□□□□□ -1.87
RPL39P62891 ATP5J2P6-201ENST00000565203 266 ntBASIC3.4□□□□□ -1.87
RPL39P62891 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.4□□□□□ -1.87
RPL39P62891 SNORA74C-1-201ENST00000580726 201 ntBASIC3.4□□□□□ -1.87
RPL39P62891 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC3.4□□□□□ -1.87
RPL39P62891 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.4□□□□□ -1.87
RPL39P62891 AC005377.1-201ENST00000605126 456 ntBASIC3.4□□□□□ -1.87
RPL39P62891 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.4□□□□□ -1.87
RPL39P62891 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RPL39P62891 MIR7109-201ENST00000613748 65 ntBASIC3.4□□□□□ -1.87
RPL39P62891 MIR6071-201ENST00000616741 78 ntBASIC3.4□□□□□ -1.87
RPL39P62891 AC005840.5-201ENST00000619166 599 ntBASIC3.4□□□□□ -1.87
RPL39P62891 AC140113.4-201ENST00000622087 222 ntBASIC3.4□□□□□ -1.87
RPL39P62891 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPL39P62891 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPL39P62891 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPL39P62891 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RPL39P62891 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPL39P62891 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPL39P62891 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
RPL39P62891 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RPL39P62891 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPL39P62891 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPL39P62891 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.39□□□□□ -1.87
RPL39P62891 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RPL39P62891 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RPL39P62891 IRF5P1-201ENST00000504852 2164 ntBASIC3.39□□□□□ -1.87
RPL39P62891 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.39□□□□□ -1.87
RPL39P62891 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.39□□□□□ -1.87
RPL39P62891 CASC19-281ENST00000642118 1554 ntBASIC3.39□□□□□ -1.87
RPL39P62891 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPL39P62891 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPL39P62891 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPL39P62891 RNU1-20P-201ENST00000363314 162 ntBASIC3.39□□□□□ -1.87
RPL39P62891 RNA5SP284-201ENST00000384547 118 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AL357515.1-201ENST00000402967 542 ntBASIC3.39□□□□□ -1.87
RPL39P62891 HDGFP1-201ENST00000405943 252 ntBASIC3.39□□□□□ -1.87
RPL39P62891 YWHAEP1-201ENST00000453697 763 ntBASIC3.39□□□□□ -1.87
RPL39P62891 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AC022795.1-201ENST00000473808 480 ntBASIC3.39□□□□□ -1.87
RPL39P62891 RPL5P22-201ENST00000480199 884 ntBASIC3.39□□□□□ -1.87
RPL39P62891 RN7SL817P-201ENST00000480777 288 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC3.39□□□□□ -1.87
RPL39P62891 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.39□□□□□ -1.87
RPL39P62891 OR5D2P-201ENST00000524390 911 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.39□□□□□ -1.87
RPL39P62891 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC3.39□□□□□ -1.87
RPL39P62891 AC090022.1-201ENST00000546569 311 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC3.39□□□□□ -1.87
RPL39P62891 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.39□□□□□ -1.87
RPL39P62891 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.39□□□□□ -1.87
RPL39P62891 MRO-208ENST00000588444 866 ntTSL 3 BASIC3.39□□□□□ -1.87
RPL39P62891 AC130352.1-201ENST00000602979 661 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AC105254.2-201ENST00000603636 436 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AL121890.2-201ENST00000617644 465 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AC004232.3-201ENST00000622977 525 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AC243960.7-201ENST00000623532 707 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AL691477.1-201ENST00000624398 162 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AC006453.5-201ENST00000636451 619 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AL596275.2-207ENST00000641188 675 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AL596275.2-204ENST00000641628 552 ntBASIC3.39□□□□□ -1.87
RPL39P62891 AL596275.2-206ENST00000641957 626 ntBASIC3.39□□□□□ -1.87
RPL39P62891 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPL39P62891 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPL39P62891 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC3.39□□□□□ -1.87
RPL39P62891 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
RPL39P62891 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPL39P62891 AC008758.3-201ENST00000507003 1829 ntBASIC3.39□□□□□ -1.87
RPL39P62891 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.39□□□□□ -1.87
RPL39P62891 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RPL39P62891 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.39□□□□□ -1.87
RPL39P62891 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPL39P62891 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPL39P62891 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPL39P62891 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPL39P62891 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RPL39P62891 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.38□□□□□ -1.87
RPL39P62891 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC3.38□□□□□ -1.87
RPL39P62891 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RPL39P62891 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPL39P62891 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPL39P62891 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
RPL39P62891 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC3.38□□□□□ -1.87
RPL39P62891 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.38□□□□□ -1.87
RPL39P62891 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC3.38□□□□□ -1.87
RPL39P62891 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPL39P62891 RN7SKP104-201ENST00000362605 328 ntBASIC3.38□□□□□ -1.87
RPL39P62891 RNA5SP510-201ENST00000364697 99 ntBASIC3.38□□□□□ -1.87
RPL39P62891 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RPL39P62891 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RPL39P62891 RNA5SP372-201ENST00000390836 115 ntBASIC3.38□□□□□ -1.87
RPL39P62891 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPL39P62891 AL021331.1-201ENST00000402817 582 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms