Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 HMGB1P44-201ENST00000508597 572 ntBASIC5.19□□□□□ -1.58
CDH13P55290 AC025768.1-201ENST00000510057 267 ntBASIC5.19□□□□□ -1.58
CDH13P55290 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH13P55290 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH13P55290 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH13P55290 FTH1P11-201ENST00000517577 551 ntBASIC5.19□□□□□ -1.58
CDH13P55290 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH13P55290 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CDH13P55290 MIR4505-201ENST00000582238 73 ntBASIC5.19□□□□□ -1.58
CDH13P55290 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH13P55290 AC007423.1-201ENST00000605009 627 ntBASIC5.19□□□□□ -1.58
CDH13P55290 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH13P55290 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH13P55290 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDH13P55290 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH13P55290 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH13P55290 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CDH13P55290 AC019072.1-201ENST00000604535 1551 ntBASIC5.19□□□□□ -1.58
CDH13P55290 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH13P55290 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH13P55290 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH13P55290 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH13P55290 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH13P55290 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CDH13P55290 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
CDH13P55290 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH13P55290 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH13P55290 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH13P55290 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDH13P55290 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CDH13P55290 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH13P55290 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.18□□□□□ -1.58
CDH13P55290 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 AC004817.4-201ENST00000602396 3625 ntBASIC5.18□□□□□ -1.58
CDH13P55290 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH13P55290 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CDH13P55290 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDH13P55290 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH13P55290 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDH13P55290 SNORA40.4-201ENST00000390971 128 ntBASIC5.18□□□□□ -1.58
CDH13P55290 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 RPL5P19-201ENST00000404228 893 ntBASIC5.18□□□□□ -1.58
CDH13P55290 Z93019.1-201ENST00000416450 973 ntBASIC5.18□□□□□ -1.58
CDH13P55290 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDH13P55290 AC073508.1-201ENST00000428866 656 ntBASIC5.18□□□□□ -1.58
CDH13P55290 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH13P55290 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH13P55290 AL513321.1-201ENST00000441175 761 ntBASIC5.18□□□□□ -1.58
CDH13P55290 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH13P55290 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH13P55290 AC245028.2-201ENST00000458673 253 ntBASIC5.18□□□□□ -1.58
CDH13P55290 CBX1P5-201ENST00000475330 559 ntBASIC5.18□□□□□ -1.58
CDH13P55290 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
CDH13P55290 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 AL049874.2-201ENST00000492636 288 ntBASIC5.18□□□□□ -1.58
CDH13P55290 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 NIFKP7-201ENST00000503365 834 ntBASIC5.18□□□□□ -1.58
CDH13P55290 MYL12BP2-201ENST00000503948 512 ntBASIC5.18□□□□□ -1.58
CDH13P55290 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH13P55290 AC108120.2-201ENST00000512973 294 ntBASIC5.18□□□□□ -1.58
CDH13P55290 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH13P55290 AC103833.1-201ENST00000517442 172 ntBASIC5.18□□□□□ -1.58
CDH13P55290 AC022360.1-201ENST00000521058 340 ntBASIC5.18□□□□□ -1.58
CDH13P55290 AC100784.1-201ENST00000522790 310 ntBASIC5.18□□□□□ -1.58
CDH13P55290 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH13P55290 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CDH13P55290 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH13P55290 AL136520.1-202ENST00000555494 763 ntBASIC5.18□□□□□ -1.58
CDH13P55290 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH13P55290 AC233266.2-201ENST00000567067 528 ntBASIC5.18□□□□□ -1.58
CDH13P55290 AC005341.1-201ENST00000571086 708 ntBASIC5.18□□□□□ -1.58
CDH13P55290 AC010547.6-201ENST00000571789 193 ntBASIC5.18□□□□□ -1.58
CDH13P55290 KATNBL1P5-201ENST00000605015 517 ntBASIC5.18□□□□□ -1.58
CDH13P55290 AC004775.1-201ENST00000607389 753 ntBASIC5.18□□□□□ -1.58
CDH13P55290 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH13P55290 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH13P55290 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH13P55290 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH13P55290 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH13P55290 TRIM51GP-201ENST00000534741 1350 ntBASIC5.17□□□□□ -1.58
CDH13P55290 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH13P55290 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH13P55290 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH13P55290 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH13P55290 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH13P55290 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms