Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC097173.1-201ENST00000505862 819 ntBASIC5.05□□□□□ -1.6
CXCL12P48061 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.05□□□□□ -1.6
CXCL12P48061 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.05□□□□□ -1.6
CXCL12P48061 RN7SKP248-201ENST00000516278 305 ntBASIC5.05□□□□□ -1.6
CXCL12P48061 SOX5P1-201ENST00000524155 1127 ntBASIC5.05□□□□□ -1.6
CXCL12P48061 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.05□□□□□ -1.6
CXCL12P48061 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.05□□□□□ -1.6
CXCL12P48061 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.05□□□□□ -1.6
CXCL12P48061 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.05□□□□□ -1.6
CXCL12P48061 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.05□□□□□ -1.6
CXCL12P48061 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.05□□□□□ -1.6
CXCL12P48061 OR7A8P-201ENST00000595427 913 ntBASIC5.05□□□□□ -1.6
CXCL12P48061 AC093765.1-201ENST00000603758 881 ntBASIC5.05□□□□□ -1.6
CXCL12P48061 AC011626.1-201ENST00000604710 562 ntBASIC5.05□□□□□ -1.6
CXCL12P48061 AL590392.1-201ENST00000604960 446 ntBASIC5.05□□□□□ -1.6
CXCL12P48061 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CXCL12P48061 KARSP3-201ENST00000571212 1504 ntBASIC5.05□□□□□ -1.6
CXCL12P48061 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.05□□□□□ -1.6
CXCL12P48061 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL12P48061 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CXCL12P48061 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL12P48061 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL12P48061 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.05□□□□□ -1.6
CXCL12P48061 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL12P48061 GVINP1-202ENST00000531871 7271 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL12P48061 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL12P48061 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL12P48061 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL12P48061 AC068769.1-201ENST00000474767 2426 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL12P48061 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL12P48061 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL12P48061 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL12P48061 BX323845.1-201ENST00000432417 179 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL12P48061 AC093414.1-201ENST00000434712 514 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 NDUFB4P8-201ENST00000435351 367 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 AC005154.2-201ENST00000438110 379 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 NOP56P2-201ENST00000447491 769 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL12P48061 AURKAPS2-201ENST00000454983 333 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL12P48061 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL12P48061 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL12P48061 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.04□□□□□ -1.6
CXCL12P48061 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL12P48061 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.04□□□□□ -1.6
CXCL12P48061 TVP23CP2-201ENST00000571473 623 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 RN7SL690P-201ENST00000582087 240 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 EIF1P5-201ENST00000585002 234 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 AC005377.1-201ENST00000605126 456 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 AP005432.2-201ENST00000608162 586 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 AC092653.1-201ENST00000608509 531 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL12P48061 AL132640.2-201ENST00000559968 1698 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CXCL12P48061 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CXCL12P48061 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CXCL12P48061 DHX40P1-201ENST00000588725 1412 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CXCL12P48061 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL12P48061 AC083899.1-201ENST00000454465 3819 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL12P48061 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CXCL12P48061 AC023632.6-201ENST00000624338 2177 ntBASIC5.04□□□□□ -1.6
CXCL12P48061 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.04□□□□□ -1.6
CXCL12P48061 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL12P48061 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.03□□□□□ -1.6
CXCL12P48061 AC139426.3-201ENST00000605648 2059 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL12P48061 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL12P48061 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL12P48061 RN7SKP186-201ENST00000365371 303 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CXCL12P48061 AL451142.1-201ENST00000375867 775 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 AL136116.2-201ENST00000404020 785 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 RN7SKP106-201ENST00000410832 272 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 GTF2IP5-201ENST00000414608 731 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 AC004690.1-201ENST00000418216 328 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 AC092651.1-201ENST00000426110 312 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.03□□□□□ -1.6
CXCL12P48061 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.03□□□□□ -1.6
CXCL12P48061 RPL12P20-201ENST00000475538 479 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 IGBP1P4-201ENST00000503202 879 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.03□□□□□ -1.6
CXCL12P48061 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.03□□□□□ -1.6
CXCL12P48061 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 AP002981.1-201ENST00000517692 975 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.03□□□□□ -1.6
CXCL12P48061 AP000619.2-201ENST00000546014 969 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.03□□□□□ -1.6
CXCL12P48061 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.03□□□□□ -1.6
CXCL12P48061 MIR4715-201ENST00000584117 79 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.03□□□□□ -1.6
CXCL12P48061 AC020910.2-201ENST00000603635 610 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 BNIP3P35-201ENST00000604530 490 ntBASIC5.03□□□□□ -1.6
CXCL12P48061 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms