Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 MTATP6P17-201ENST00000431030 672 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXD12P35452 CUBNP2-201ENST00000443534 1139 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 AL022237.1-201ENST00000446663 358 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 OR7E116P-201ENST00000448529 957 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 AC073594.1-201ENST00000462065 364 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 AC100832.1-201ENST00000471945 383 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXD12P35452 AC093770.1-201ENST00000511559 571 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXD12P35452 snoU109.6-201ENST00000516831 118 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXD12P35452 HAUS8P1-201ENST00000549005 542 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 AC084759.1-201ENST00000561168 290 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXD12P35452 AC027334.1-201ENST00000603257 310 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 AC024589.2-201ENST00000605642 1294 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 AL021368.3-201ENST00000607119 578 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 AP001005.3-201ENST00000622049 129 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 MIR8080-201ENST00000622224 89 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 AC099654.8-201ENST00000637757 681 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXD12P35452 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD12P35452 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXD12P35452 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXD12P35452 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXD12P35452 AC007938.2-201ENST00000604666 2634 ntBASIC5.78□□□□□ -1.48
HOXD12P35452 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD12P35452 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD12P35452 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD12P35452 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD12P35452 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HOXD12P35452 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
HOXD12P35452 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD12P35452 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD12P35452 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD12P35452 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD12P35452 RNU6-171P-201ENST00000384354 107 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 MIR223-201ENST00000385204 110 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 RNU6-584P-201ENST00000410350 95 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD12P35452 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD12P35452 AC012075.1-201ENST00000436549 580 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 Z80107.1-201ENST00000436830 412 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 AL390879.1-201ENST00000439143 386 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD12P35452 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD12P35452 RPS27AP3-201ENST00000453803 454 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD12P35452 AC073610.1-201ENST00000489971 396 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 RN7SL547P-201ENST00000490793 290 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD12P35452 TRAV31-201ENST00000502780 342 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD12P35452 AC108120.2-201ENST00000512973 294 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 SCARNA6.1-201ENST00000516989 238 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD12P35452 MRPS16P1-201ENST00000523462 412 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD12P35452 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD12P35452 YWHAZP1-201ENST00000556286 722 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXD12P35452 AC096996.1-201ENST00000563813 325 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 RN7SL339P-201ENST00000580597 296 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD12P35452 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXD12P35452 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.77□□□□□ -1.49
HOXD12P35452 AC010245.2-201ENST00000606908 1167 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 AP003476.1-201ENST00000623984 516 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD12P35452 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD12P35452 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD12P35452 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD12P35452 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD12P35452 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD12P35452 SAMMSON-213ENST00000641336 1521 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 AC011815.2-201ENST00000618230 2021 ntBASIC5.77□□□□□ -1.49
HOXD12P35452 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXD12P35452 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD12P35452 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD12P35452 FBXL21-201ENST00000297158 1305 ntBASIC5.76□□□□□ -1.49
HOXD12P35452 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD12P35452 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD12P35452 MTCO1P4-201ENST00000520516 1409 ntBASIC5.76□□□□□ -1.49
HOXD12P35452 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD12P35452 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXD12P35452 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HOXD12P35452 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HOXD12P35452 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD12P35452 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD12P35452 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXD12P35452 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXD12P35452 AL663074.2-201ENST00000440621 479 ntBASIC5.76□□□□□ -1.49
HOXD12P35452 AL355032.1-201ENST00000472981 438 ntBASIC5.76□□□□□ -1.49
HOXD12P35452 HMGB1P3-201ENST00000502802 616 ntBASIC5.76□□□□□ -1.49
HOXD12P35452 CCDC11P1-201ENST00000503137 1162 ntBASIC5.76□□□□□ -1.49
HOXD12P35452 CDC42P3-201ENST00000518493 633 ntBASIC5.76□□□□□ -1.49
HOXD12P35452 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXD12P35452 AP001372.4-201ENST00000524889 472 ntBASIC5.76□□□□□ -1.49
HOXD12P35452 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms