Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RPL7P11-201ENST00000437586 658 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 SERPINA7P1-201ENST00000443077 631 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXA9P31269 AC009220.1-201ENST00000451614 275 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 RN7SL814P-201ENST00000487715 300 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 RN7SL205P-201ENST00000490174 284 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 RPS12P31-201ENST00000491419 398 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA9P31269 IGBP1P4-201ENST00000503202 879 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXA9P31269 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXA9P31269 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXA9P31269 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXA9P31269 AC019322.1-201ENST00000571869 389 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 AC090286.3-201ENST00000573133 187 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXA9P31269 RN7SL52P-201ENST00000584271 284 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA9P31269 AF230666.2-201ENST00000602328 725 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 AC011626.1-201ENST00000604710 562 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 AP001521.2-201ENST00000608772 546 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 RN7SL722P-201ENST00000617780 284 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 RN7SL565P-201ENST00000618246 284 ntBASIC5.35□□□□□ -1.55
HOXA9P31269 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA9P31269 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA9P31269 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA9P31269 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HOXA9P31269 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA9P31269 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA9P31269 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXA9P31269 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA9P31269 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA9P31269 MFSD8-216ENST00000641147 4009 ntBASIC5.34□□□□□ -1.55
HOXA9P31269 AC004656.1-201ENST00000568479 4951 ntBASIC5.34□□□□□ -1.55
HOXA9P31269 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA9P31269 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HOXA9P31269 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA9P31269 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HOXA9P31269 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HOXA9P31269 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HOXA9P31269 AC079809.1-201ENST00000415468 276 ntBASIC5.34□□□□□ -1.55
HOXA9P31269 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA9P31269 AC090018.1-201ENST00000434369 367 ntBASIC5.34□□□□□ -1.55
HOXA9P31269 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA9P31269 RBMY2TP-201ENST00000451162 947 ntBASIC5.34□□□□□ -1.55
HOXA9P31269 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA9P31269 RN7SL319P-201ENST00000480656 221 ntBASIC5.34□□□□□ -1.55
HOXA9P31269 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA9P31269 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.34□□□□□ -1.55
HOXA9P31269 GCSHP4-201ENST00000538792 439 ntBASIC5.34□□□□□ -1.55
HOXA9P31269 AC027216.1-201ENST00000577726 685 ntBASIC5.34□□□□□ -1.55
HOXA9P31269 AC091042.1-201ENST00000579213 173 ntBASIC5.34□□□□□ -1.55
HOXA9P31269 MIR3667-201ENST00000581025 74 ntBASIC5.34□□□□□ -1.55
HOXA9P31269 AL391358.1-201ENST00000605342 190 ntBASIC5.34□□□□□ -1.55
HOXA9P31269 AC105105.5-201ENST00000622635 1294 ntBASIC5.34□□□□□ -1.55
HOXA9P31269 MIR6810-201ENST00000622701 70 ntBASIC5.34□□□□□ -1.55
HOXA9P31269 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA9P31269 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXA9P31269 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA9P31269 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA9P31269 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
HOXA9P31269 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA9P31269 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA9P31269 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.34□□□□□ -1.56
HOXA9P31269 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA9P31269 AC019072.1-201ENST00000604535 1551 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXA9P31269 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA9P31269 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA9P31269 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HOXA9P31269 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA9P31269 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA9P31269 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA9P31269 CDC27P2-201ENST00000425026 1922 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA9P31269 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA9P31269 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA9P31269 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXA9P31269 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXA9P31269 RNU6-249P-201ENST00000363016 102 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 SNORA48.4-201ENST00000391089 134 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 RNU2-50P-201ENST00000410494 143 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 GPS2P1-201ENST00000411761 986 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA9P31269 RPL12P43-201ENST00000420608 499 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 ELOCP3-201ENST00000439303 348 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 AL359265.1-201ENST00000440296 795 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 OR52J1P-201ENST00000450596 932 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 RN7SL443P-201ENST00000464331 290 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 AC063943.1-201ENST00000465434 453 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 AC020779.1-201ENST00000478757 796 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA9P31269 SEPT10P1-201ENST00000517342 1162 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA9P31269 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA9P31269 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA9P31269 ELOCP28-201ENST00000590044 317 ntBASIC5.33□□□□□ -1.56
HOXA9P31269 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA9P31269 AL022394.1-201ENST00000606979 292 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms