Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.28□□□□□ -1.56
ABCD3P28288 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.28□□□□□ -1.56
ABCD3P28288 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.28□□□□□ -1.56
ABCD3P28288 NANOGP3-201ENST00000605855 286 ntBASIC5.28□□□□□ -1.56
ABCD3P28288 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ABCD3P28288 AC090607.5-201ENST00000615692 224 ntBASIC5.28□□□□□ -1.56
ABCD3P28288 AC007275.1-201ENST00000621243 671 ntBASIC5.28□□□□□ -1.56
ABCD3P28288 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.28□□□□□ -1.56
ABCD3P28288 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
ABCD3P28288 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
ABCD3P28288 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ABCD3P28288 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ABCD3P28288 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.28□□□□□ -1.56
ABCD3P28288 PWAR1-201ENST00000624188 2414 ntBASIC5.28□□□□□ -1.56
ABCD3P28288 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ABCD3P28288 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.28□□□□□ -1.56
ABCD3P28288 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ABCD3P28288 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.28□□□□□ -1.56
ABCD3P28288 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.28□□□□□ -1.56
ABCD3P28288 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ABCD3P28288 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
ABCD3P28288 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ABCD3P28288 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ABCD3P28288 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ABCD3P28288 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ABCD3P28288 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ABCD3P28288 OR13C1P-202ENST00000641378 2919 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
ABCD3P28288 KYNUP3-201ENST00000574386 1341 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ABCD3P28288 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.27□□□□□ -1.57
ABCD3P28288 AC009313.2-201ENST00000417893 1941 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ABCD3P28288 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ABCD3P28288 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
ABCD3P28288 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
ABCD3P28288 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ABCD3P28288 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ABCD3P28288 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
ABCD3P28288 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
ABCD3P28288 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ABCD3P28288 SNORA64.1-201ENST00000362600 132 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ABCD3P28288 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
ABCD3P28288 AL031985.1-201ENST00000392713 418 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 Z68694.1-201ENST00000413929 841 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 UBE2V1P9-201ENST00000414760 368 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.27□□□□□ -1.57
ABCD3P28288 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.27□□□□□ -1.57
ABCD3P28288 AC093155.2-201ENST00000420734 937 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 DEFB130D-201ENST00000426866 237 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.27□□□□□ -1.57
ABCD3P28288 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.27□□□□□ -1.57
ABCD3P28288 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.27□□□□□ -1.57
ABCD3P28288 KRT8P51-201ENST00000438938 274 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 AL645931.1-201ENST00000439737 410 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.27□□□□□ -1.57
ABCD3P28288 RPL31P15-201ENST00000449770 338 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.27□□□□□ -1.57
ABCD3P28288 RPL12P39-201ENST00000455456 496 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.27□□□□□ -1.57
ABCD3P28288 METTL15P1-201ENST00000481421 1045 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 RPS3AP15-201ENST00000483874 781 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 DUTP1-201ENST00000493631 470 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 AC010627.1-201ENST00000503819 1294 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.27□□□□□ -1.57
ABCD3P28288 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.27□□□□□ -1.57
ABCD3P28288 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.27□□□□□ -1.57
ABCD3P28288 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ABCD3P28288 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.27□□□□□ -1.57
ABCD3P28288 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.27□□□□□ -1.57
ABCD3P28288 MIR3614-201ENST00000581261 86 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.27□□□□□ -1.57
ABCD3P28288 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.27□□□□□ -1.57
ABCD3P28288 AC063977.5-201ENST00000601044 974 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 AC055764.2-201ENST00000610089 670 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 FRG1HP-204ENST00000617940 757 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 AC139769.3-201ENST00000618383 175 ntBASIC5.27□□□□□ -1.57
ABCD3P28288 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.27□□□□□ -1.57
ABCD3P28288 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.27□□□□□ -1.57
ABCD3P28288 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.27□□□□□ -1.57
ABCD3P28288 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ABCD3P28288 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
ABCD3P28288 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.27□□□□□ -1.57
ABCD3P28288 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ABCD3P28288 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.27□□□□□ -1.57
ABCD3P28288 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
ABCD3P28288 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.26□□□□□ -1.57
ABCD3P28288 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
ABCD3P28288 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.26□□□□□ -1.57
ABCD3P28288 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ABCD3P28288 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
ABCD3P28288 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.26□□□□□ -1.57
ABCD3P28288 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ABCD3P28288 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ABCD3P28288 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.26□□□□□ -1.57
ABCD3P28288 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ABCD3P28288 AC011933.2-201ENST00000578539 2790 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 RNA5SP27-201ENST00000363839 119 ntBASIC5.26□□□□□ -1.57
ABCD3P28288 RN7SKP81-201ENST00000365603 331 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms