Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AP006245.2-201ENST00000522004 300 ntBASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC018695.5-201ENST00000605872 315 ntBASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC090527.3-201ENST00000619041 548 ntBASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 BX005214.3-202ENST00000619809 325 ntBASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TCRBV4S1A1TA0A5B7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 MIR550A3-201ENST00000390735 95 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 OR8V1P-201ENST00000395193 873 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 CHMP1B2P-201ENST00000399581 597 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AL133270.1-201ENST00000402635 279 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RPS29P10-201ENST00000439197 166 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 OTX2P1-201ENST00000450956 354 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC006427.1-201ENST00000514359 712 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 OR4A46P-201ENST00000527255 933 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AP000676.2-201ENST00000529711 301 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AL353662.3-201ENST00000625131 237 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC135068.12-201ENST00000637370 931 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC092747.4-201ENST00000620519 1861 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 MAPK10-263ENST00000641052 4307 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC112255.1-201ENST00000624070 2493 ntBASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.11□□□□□ -1.75
TCRBV4S1A1TA0A5B7 A2MP1-204ENST00000566278 4130 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC063923.1-201ENST00000478982 1619 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RNU4-4P-201ENST00000364588 130 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RN7SKP97-201ENST00000410966 333 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 VN1R54P-201ENST00000435210 1049 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RPL7P61-201ENST00000451721 751 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 snoU13.20-201ENST00000459180 104 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC231760.1-201ENST00000498002 260 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RN7SKP147-201ENST00000517154 244 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RNA5SP373-201ENST00000517271 95 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 AC013701.1-201ENST00000522657 465 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 GTF2IP11-201ENST00000526931 420 ntBASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.1□□□□□ -1.75
TCRBV4S1A1TA0A5B7 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms