Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 AC026348.1-201ENST00000462549 1053 ntBASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 RN7SL222P-201ENST00000476452 299 ntBASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 AC025423.2-201ENST00000537570 439 ntBASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 MTND4LP25-201ENST00000570218 163 ntBASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 AL451049.1-201ENST00000608672 497 ntBASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 AC007786.3-201ENST00000615154 596 ntBASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 AC079298.1-201ENST00000625026 1619 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 OR1F12-201ENST00000402365 945 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 DUTP5-201ENST00000406790 469 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 RNU4-34P-201ENST00000410431 124 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 MTND2P40-201ENST00000436718 841 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 ARAFP2-201ENST00000440565 559 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 MED28P3-201ENST00000444288 531 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 AC005532.2-201ENST00000467154 373 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 RPS18P6-201ENST00000476880 458 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 RN7SL727P-201ENST00000482164 296 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 AC008638.1-201ENST00000506035 866 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 AC104997.1-201ENST00000519761 717 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 OR10G5P-201ENST00000532733 358 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 OR11J2P-201ENST00000555298 907 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 AC027216.1-201ENST00000577726 685 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 VN1R81P-201ENST00000602085 372 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 AC013244.1-201ENST00000604279 193 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 AC105148.1-201ENST00000604961 409 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 AC090527.3-201ENST00000619041 548 ntBASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX9Q9Y5X1 THAP12P8-201ENST00000447914 2115 ntBASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 RN7SKP145-201ENST00000363291 303 ntBASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 RNU1-146P-201ENST00000364015 165 ntBASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 RNU6-1176P-201ENST00000390955 107 ntBASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 RN7SKP273-201ENST00000411392 314 ntBASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 BMS1P13-201ENST00000417301 885 ntBASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 RPL17P35-201ENST00000432217 549 ntBASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 EEF1B2P5-201ENST00000444820 548 ntBASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 Z92846.1-201ENST00000456203 268 ntBASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 AC079168.1-201ENST00000458741 345 ntBASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 OR10D4P-201ENST00000525892 951 ntBASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX9Q9Y5X1 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms