Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 ZNF733P-202ENST00000444809 1573 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 DUTP5-201ENST00000406790 469 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 RNU2-22P-201ENST00000411266 212 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 RBMY2KP-201ENST00000418221 992 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 VN1R54P-201ENST00000435210 1049 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 AC245047.2-201ENST00000441060 530 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 AC091685.2-201ENST00000454924 864 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 RPL7AP6-201ENST00000477943 801 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 RPSAP50-201ENST00000481955 852 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 RN7SL97P-201ENST00000486780 299 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 AC072052.1-201ENST00000496556 306 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 OR5D15P-201ENST00000531671 942 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 AC022884.2-201ENST00000578535 580 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 MIR3936-201ENST00000584304 110 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 Mico1.1-201ENST00000611698 204 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 AL049539.1-201ENST00000611964 459 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 AL139407.1-201ENST00000613826 1175 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 NAMPTP1-201ENST00000440465 2514 ntBASIC6.19□□□□□ -1.42
CTNNA3Q9UI47 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 SMG1P7-201ENST00000565246 2704 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 AC131971.1-201ENST00000332881 1482 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 AC007068.1-201ENST00000396690 844 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 NPM1P40-201ENST00000412758 733 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 RPL12P9-201ENST00000412942 488 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 COX5BP7-201ENST00000414780 274 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 AC108161.1-201ENST00000461060 402 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 AC008953.1-201ENST00000497334 318 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 AC097173.1-201ENST00000505862 819 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 RN7SKP5-201ENST00000517045 272 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 AC022832.1-201ENST00000530718 645 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 AP002505.2-201ENST00000623585 696 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 SCARNA15-201ENST00000607520 4325 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 PANDAR-201ENST00000629595 1506 ntBASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CTNNA3Q9UI47 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 AC046176.1-201ENST00000435260 1170 ntBASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 FAR2P1-206ENST00000449736 709 ntBASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 AL389915.2-201ENST00000454576 441 ntBASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 TPT1P1-201ENST00000458495 518 ntBASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 AC009127.1-201ENST00000467090 155 ntBASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 SNRPCP2-201ENST00000504370 475 ntBASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 RN7SKP66-201ENST00000516681 231 ntBASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.17□□□□□ -1.42
CTNNA3Q9UI47 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms