Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 GUCY1B2-204ENST00000531898 1979 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AP000432.2-201ENST00000624164 2048 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 IGKV7-3-201ENST00000357453 298 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 RNU6-707P-201ENST00000364647 95 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 RN7SKP237-201ENST00000364663 301 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 RNA5SP279-201ENST00000365513 117 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 RNU2-18P-201ENST00000411224 162 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 UBE2V1P14-201ENST00000415815 558 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 RPL24P2-201ENST00000421023 475 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AC007435.1-201ENST00000421086 415 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AC011233.1-201ENST00000422812 283 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AL139421.1-201ENST00000423010 169 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 RPS7P14-201ENST00000426405 583 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 IGLV3-4-201ENST00000432300 244 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 HMGB1P45-201ENST00000435986 653 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 ATP5C1P1-201ENST00000441945 895 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 DNAJC19P5-201ENST00000443295 316 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 BX248409.1-201ENST00000455497 255 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 OSTCP1-201ENST00000455507 450 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 TPTE2P5-203ENST00000458118 728 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AC092754.2-201ENST00000463506 460 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AC037198.2-201ENST00000478845 733 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AC090114.3-201ENST00000479267 829 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AC021006.1-201ENST00000489849 553 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 RNU6-232P-201ENST00000517144 64 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 MIR4420-201ENST00000583944 77 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AP005137.2-201ENST00000609238 400 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 MIR7109-201ENST00000613748 65 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 TCL6_3.1-201ENST00000619064 137 ntBASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
TRIM39Q9HCM9 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM39Q9HCM9 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM39Q9HCM9 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.21□□□□□ -1.41
TRIM39Q9HCM9 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM39Q9HCM9 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.21□□□□□ -1.41
TRIM39Q9HCM9 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM39Q9HCM9 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM39Q9HCM9 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.21□□□□□ -1.41
TRIM39Q9HCM9 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM39Q9HCM9 AL445523.1-201ENST00000451184 1362 ntBASIC6.21□□□□□ -1.41
TRIM39Q9HCM9 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.21□□□□□ -1.41
TRIM39Q9HCM9 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 RN7SKP187-201ENST00000365536 330 ntBASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 MIR1303-201ENST00000408625 86 ntBASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 MIR1275-201ENST00000408770 80 ntBASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 RN7SKP121-201ENST00000410842 305 ntBASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 AL035422.1-201ENST00000414193 397 ntBASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 GAPDHP49-201ENST00000421421 961 ntBASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 AC066692.1-201ENST00000421721 457 ntBASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 AC022022.1-201ENST00000430304 178 ntBASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 USP9YP22-201ENST00000438971 294 ntBASIC6.21□□□□□ -1.42
TRIM39Q9HCM9 AL445567.1-201ENST00000439121 144 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms