Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 CASC19-222ENST00000641321 1173 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 CR383656.5-201ENST00000547616 1340 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 CDY11P-201ENST00000447168 1651 ntBASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RSPO3Q9BXY4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 STX3-208ENST00000641815 3236 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 AC007996.1-201ENST00000620414 2821 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 UBBP2-201ENST00000376781 231 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 AL133270.1-201ENST00000402635 279 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 AC002524.1-201ENST00000411687 547 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 TMBIM7P-201ENST00000418074 855 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 AC013429.2-201ENST00000418798 781 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 RPS11P7-201ENST00000442125 465 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 KNOP1P3-201ENST00000446933 426 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 COPS8P2-201ENST00000473228 627 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 OR11I1P-201ENST00000486033 954 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 AC010350.1-201ENST00000504908 231 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 AP002373.2-201ENST00000541631 1060 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 AC095055.1-201ENST00000603472 1113 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 MTCO1P46-201ENST00000451639 1491 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 AL590763.1-201ENST00000398297 1545 ntBASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RSPO3Q9BXY4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AL353625.1-202ENST00000366273 571 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 RNU6-171P-201ENST00000384354 107 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 MIR1286-201ENST00000408112 78 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 GTF3AP5-201ENST00000442645 697 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 USP9YP2-201ENST00000504503 1000 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AC093763.2-201ENST00000505334 1223 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 USP9YP1-201ENST00000513521 1002 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AP000859.1-201ENST00000525536 307 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AC011453.2-201ENST00000603737 729 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AC104687.2-201ENST00000604442 342 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AC004948.1-201ENST00000609858 672 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AL136295.6-201ENST00000610486 658 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 MIR7155-201ENST00000615925 56 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 AC087821.1-201ENST00000623639 567 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms