Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 RPS24P16-201ENST00000497294 392 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 RPL7L1P4-201ENST00000513004 707 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 TRIM77BP-201ENST00000524985 1119 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.06□□□□□ -1.6
PKP2Q99959 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PKP2Q99959 AC090022.1-201ENST00000546569 311 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PKP2Q99959 CYCSP38-201ENST00000559840 322 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 RN7SL435P-201ENST00000584418 282 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.06□□□□□ -1.6
PKP2Q99959 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.06□□□□□ -1.6
PKP2Q99959 AC100767.2-201ENST00000604840 693 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 AC005014.3-201ENST00000605985 190 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 AC092953.2-201ENST00000608000 699 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.06□□□□□ -1.6
PKP2Q99959 AP001437.1-201ENST00000608783 456 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PKP2Q99959 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.06□□□□□ -1.6
PKP2Q99959 AC025574.2-201ENST00000615621 514 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.06□□□□□ -1.6
PKP2Q99959 AC015871.5-202ENST00000623252 701 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 AC073592.7-201ENST00000623659 507 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 AP000648.2-201ENST00000624182 404 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 AC019080.5-201ENST00000624891 757 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.06□□□□□ -1.6
PKP2Q99959 AC129915.3-201ENST00000634128 948 ntBASIC5.06□□□□□ -1.6
PKP2Q99959 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.06□□□□□ -1.6
PKP2Q99959 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PKP2Q99959 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.06□□□□□ -1.6
PKP2Q99959 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PKP2Q99959 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PKP2Q99959 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
PKP2Q99959 AC007996.1-201ENST00000620414 2821 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.05□□□□□ -1.6
PKP2Q99959 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PKP2Q99959 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.05□□□□□ -1.6
PKP2Q99959 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
PKP2Q99959 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.05□□□□□ -1.6
PKP2Q99959 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PKP2Q99959 ZNF652P1-201ENST00000442420 1309 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
PKP2Q99959 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PKP2Q99959 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC083799.1-201ENST00000366451 910 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 LYPLA1P3-201ENST00000402650 695 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 AC233289.1-201ENST00000403700 508 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 BMS1P13-201ENST00000417301 885 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 BTF3P9-201ENST00000418784 283 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC124944.2-201ENST00000429866 1242 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.05□□□□□ -1.6
PKP2Q99959 PNKDP1-201ENST00000435914 430 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.05□□□□□ -1.6
PKP2Q99959 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.05□□□□□ -1.6
PKP2Q99959 HLA-DPA3-207ENST00000454398 229 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.05□□□□□ -1.6
PKP2Q99959 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PKP2Q99959 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.05□□□□□ -1.6
PKP2Q99959 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.05□□□□□ -1.6
PKP2Q99959 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PKP2Q99959 RN7SKP238-201ENST00000516483 249 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.05□□□□□ -1.6
PKP2Q99959 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PKP2Q99959 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.05□□□□□ -1.6
PKP2Q99959 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC092266.1-201ENST00000610958 165 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 AP003499.2-201ENST00000624100 483 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC119674.1-220ENST00000641502 1048 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PKP2Q99959 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.05□□□□□ -1.6
PKP2Q99959 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.05□□□□□ -1.6
PKP2Q99959 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
PKP2Q99959 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PKP2Q99959 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
PKP2Q99959 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PKP2Q99959 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
PKP2Q99959 AC093225.1-201ENST00000506867 1408 ntBASIC5.05□□□□□ -1.6
PKP2Q99959 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PKP2Q99959 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PKP2Q99959 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PKP2Q99959 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.05□□□□□ -1.6
PKP2Q99959 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.05□□□□□ -1.6
PKP2Q99959 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.04□□□□□ -1.6
PKP2Q99959 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PKP2Q99959 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PKP2Q99959 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PKP2Q99959 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PKP2Q99959 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PKP2Q99959 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PKP2Q99959 OR5T3-201ENST00000303059 1023 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms