Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 SLC9B1P1-201ENST00000331172 1337 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 SSR1P1-201ENST00000407630 814 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 ATG4AP1-201ENST00000416893 538 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC013429.2-201ENST00000418798 781 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 RPS11P7-201ENST00000442125 465 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 GAPDHP25-201ENST00000447061 1001 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 LRRC37A14P-201ENST00000452297 462 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 LDHBP2-201ENST00000456969 1005 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 CCDC75P1-201ENST00000469247 791 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC098583.1-201ENST00000480875 255 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 FGB-207ENST00000509493 1164 ntTSL 5 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 RNA5SP249-201ENST00000516127 99 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 NRBF2P4-201ENST00000520874 850 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 EIF4A2P5-201ENST00000529914 499 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC026826.3-201ENST00000561747 158 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 CD24P2-201ENST00000565486 219 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC060766.1-201ENST00000590824 627 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC011626.1-201ENST00000604710 562 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 uc_338.18-201ENST00000615451 175 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AL356121.2-201ENST00000624715 780 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 AC093535.2-201ENST00000624769 2326 ntBASIC3.82□□□□□ -1.8
AP1S3Q96PC3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
AP1S3Q96PC3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 YES1P1-201ENST00000418510 1628 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 KPNA2P2-201ENST00000419546 1489 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 MIR448-201ENST00000362131 111 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AL390316.1-201ENST00000406279 553 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 MIR1275-201ENST00000408770 80 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 RPS26P4-201ENST00000431743 355 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 GAPDHP34-201ENST00000432112 823 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 CLUHP1-201ENST00000435012 1190 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 HMGB3P9-201ENST00000441799 583 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 NOP56P2-201ENST00000447491 769 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 RPL7L1P1-201ENST00000448259 785 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 RBMY2TP-201ENST00000451162 947 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AC005008.1-201ENST00000456151 612 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 GYG1P1-201ENST00000460864 698 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 RPL7P40-201ENST00000481703 745 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 CASP1P2-201ENST00000526830 1258 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 RAB30-209ENST00000532548 644 ntTSL 3 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AP004607.2-201ENST00000533949 322 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 GSTP1P1-201ENST00000548078 319 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AC068305.2-201ENST00000550567 1205 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 RNF138P2-201ENST00000603490 592 ntBASIC3.81□□□□□ -1.8
AP1S3Q96PC3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC3.81□□□□□ -1.8
AP1S3Q96PC3 MIR6806-201ENST00000622141 64 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms