Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 AC026348.1-201ENST00000462549 1053 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 RN7SL443P-201ENST00000464331 290 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 AC020890.1-201ENST00000491837 504 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 CYCSP40-201ENST00000575927 294 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 TAS2R6P-201ENST00000605022 826 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 SCARNA15-201ENST00000607520 4325 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 RN7SKP160-201ENST00000363804 340 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 RN7SKP113-201ENST00000363891 295 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 RNU1-149P-201ENST00000390870 161 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 RNA5SP339-201ENST00000390987 122 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 MIR1182-201ENST00000408363 97 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 RN7SKP278-201ENST00000410504 342 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 QRSL1P2-201ENST00000418582 964 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 EIF4A1P1-201ENST00000420241 934 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 AC012519.1-201ENST00000424588 610 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 AL450023.3-201ENST00000440592 271 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 CYCSP51-201ENST00000443545 318 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 MYO5BP2-201ENST00000449815 1277 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 CYCSP34-201ENST00000458172 304 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 AC090589.1-201ENST00000473109 362 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 RPL7P6-201ENST00000480903 738 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 EIF1P7-201ENST00000487533 337 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 RNU6-941P-201ENST00000516346 108 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 OR7E18P-201ENST00000592589 702 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 WBP1LP8-201ENST00000617401 327 ntBASIC4.8□□□□□ -1.64
LRRC58Q96CX6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC58Q96CX6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 AC133552.1-201ENST00000569988 4007 ntBASIC4.79□□□□□ -1.64
LRRC58Q96CX6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRRC58Q96CX6 RNA5SP132-201ENST00000364725 118 ntBASIC4.79□□□□□ -1.64
LRRC58Q96CX6 RN7SKP97-201ENST00000410966 333 ntBASIC4.79□□□□□ -1.64
LRRC58Q96CX6 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms