Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 OR5AK1P-201ENST00000524837 922 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 VN1R92P-201ENST00000598511 928 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AC017083.3-201ENST00000609955 700 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 MIR6085-201ENST00000618314 110 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AL359740.1-201ENST00000624340 592 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 LINC02495-203ENST00000636704 242 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 MIR193BHG-214ENST00000641765 509 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 MAPK10-377ENST00000642006 2752 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 CDR1-202ENST00000625883 1485 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
NPAS4Q8IUM7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC7.09□□□□□ -1.28
NPAS4Q8IUM7 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
NPAS4Q8IUM7 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
NPAS4Q8IUM7 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC093278.2-201ENST00000564956 2485 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 RPL12P13-201ENST00000310055 497 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 RNU6-694P-201ENST00000364071 147 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 Y_RNA.553-201ENST00000384670 102 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 RNU6-272P-201ENST00000411028 104 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC006366.1-201ENST00000422002 759 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 RPL7AP14-201ENST00000424041 802 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 RNU6-956P-201ENST00000458868 103 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 GLYATL1P2-202ENST00000588046 902 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 U73023.1-201ENST00000603134 700 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AL353621.2-201ENST00000605340 133 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC009878.1-201ENST00000621819 340 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC005225.5-201ENST00000623547 2225 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 UGT2B25P-201ENST00000511504 1586 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC073544.1-201ENST00000600110 1595 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 AC092725.2-201ENST00000567658 1389 ntBASIC7.08□□□□□ -1.28
NPAS4Q8IUM7 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.07□□□□□ -1.28
NPAS4Q8IUM7 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms