Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
RNF43Q68DV7 AC018765.1-201ENST00000623357 3446 ntBASIC6.94□□□□□ -1.3
RNF43Q68DV7 AC087392.3-202ENST00000358446 1754 ntBASIC6.94□□□□□ -1.3
RNF43Q68DV7 AL591848.4-201ENST00000567832 3472 ntBASIC6.94□□□□□ -1.3
RNF43Q68DV7 AC034229.2-201ENST00000566945 2508 ntBASIC6.94□□□□□ -1.3
RNF43Q68DV7 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
RNF43Q68DV7 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
RNF43Q68DV7 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RNF43Q68DV7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RNF43Q68DV7 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RNF43Q68DV7 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RNF43Q68DV7 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.94□□□□□ -1.3
RNF43Q68DV7 AL359715.3-201ENST00000569267 2123 ntBASIC6.94□□□□□ -1.3
RNF43Q68DV7 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RNF43Q68DV7 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AL451064.2-201ENST00000623514 1654 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AP000547.3-204ENST00000588548 2523 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 TNPO1P2-201ENST00000426249 2665 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 RN7SKP237-201ENST00000364663 301 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 RNA5SP85-201ENST00000365378 119 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AL590002.1-201ENST00000406554 418 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 C1DP2-201ENST00000418167 426 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 RPL12P43-201ENST00000420608 499 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC115283.1-201ENST00000427353 400 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 PSMD10P2-201ENST00000432890 672 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC000111.3-201ENST00000433478 193 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 NFU1P2-201ENST00000448700 469 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AKR1D1P1-201ENST00000457236 936 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 RN7SL216P-201ENST00000471607 298 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC005017.1-201ENST00000482002 490 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC109486.1-201ENST00000486833 374 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC113347.3-201ENST00000509113 148 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AL445383.1-201ENST00000554689 874 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC009063.1-201ENST00000563342 702 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC005726.4-201ENST00000582858 458 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC011497.2-201ENST00000600255 639 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AL392112.1-201ENST00000605115 829 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC091768.1-201ENST00000609258 930 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC092681.3-201ENST00000609463 678 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC097505.1-201ENST00000610199 565 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 RN7SL261P-201ENST00000613441 282 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 MIR6729-201ENST00000618194 65 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AL607023.1-201ENST00000620045 248 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC019278.1-201ENST00000623516 479 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC022400.9-201ENST00000623633 273 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 RACGAP1P-201ENST00000550663 1879 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AP002370.1-201ENST00000528055 1602 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 AL731556.1-201ENST00000394628 3711 ntBASIC6.93□□□□□ -1.3
RNF43Q68DV7 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
RNF43Q68DV7 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RNF43Q68DV7 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms