Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC108751.5-201ENST00000492880 1336 ntBASIC4.9□□□□□ -1.62
RIF1Q5UIP0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 OR9K1P-202ENST00000641111 3217 ntBASIC4.9□□□□□ -1.62
RIF1Q5UIP0 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC4.9□□□□□ -1.62
RIF1Q5UIP0 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 AC233289.1-201ENST00000403700 508 ntBASIC4.9□□□□□ -1.63
RIF1Q5UIP0 RIMKLBP2-201ENST00000424737 654 ntBASIC4.9□□□□□ -1.63
RIF1Q5UIP0 TCEA1P1-201ENST00000449716 880 ntBASIC4.9□□□□□ -1.63
RIF1Q5UIP0 RN7SL435P-201ENST00000584418 282 ntBASIC4.9□□□□□ -1.63
RIF1Q5UIP0 AC115286.1-201ENST00000604298 434 ntBASIC4.9□□□□□ -1.63
RIF1Q5UIP0 AP005432.2-201ENST00000608162 586 ntBASIC4.9□□□□□ -1.63
RIF1Q5UIP0 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 IARS-213ENST00000627121 4587 ntTSL 5 BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RIF1Q5UIP0 RAD17P1-201ENST00000418130 2042 ntBASIC4.89□□□□□ -1.63
RIF1Q5UIP0 MIR640-201ENST00000385086 96 ntBASIC4.89□□□□□ -1.63
RIF1Q5UIP0 AF186996.5-201ENST00000418098 904 ntBASIC4.89□□□□□ -1.63
RIF1Q5UIP0 RPL34P27-201ENST00000428810 349 ntBASIC4.89□□□□□ -1.63
RIF1Q5UIP0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 OR5M2P-201ENST00000529003 936 ntBASIC4.89□□□□□ -1.63
RIF1Q5UIP0 AP005901.4-201ENST00000577336 569 ntBASIC4.89□□□□□ -1.63
RIF1Q5UIP0 RPL7P50-201ENST00000600588 727 ntBASIC4.89□□□□□ -1.63
RIF1Q5UIP0 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 OR4F13P-202ENST00000560066 2054 ntBASIC4.89□□□□□ -1.63
RIF1Q5UIP0 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 CYCSP11-201ENST00000436426 315 ntBASIC4.89□□□□□ -1.63
RIF1Q5UIP0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 AC073073.1-201ENST00000493920 463 ntBASIC4.89□□□□□ -1.63
RIF1Q5UIP0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 AL035461.2-201ENST00000619201 524 ntBASIC4.89□□□□□ -1.63
RIF1Q5UIP0 MIR6853-201ENST00000619642 74 ntBASIC4.89□□□□□ -1.63
RIF1Q5UIP0 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RIF1Q5UIP0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 TRAV35-201ENST00000390462 330 ntBASIC4.88□□□□□ -1.63
RIF1Q5UIP0 U3.30-201ENST00000391308 210 ntBASIC4.88□□□□□ -1.63
RIF1Q5UIP0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 RPS29P17-201ENST00000430795 166 ntBASIC4.88□□□□□ -1.63
RIF1Q5UIP0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 SNORD125-201ENST00000459538 96 ntBASIC4.88□□□□□ -1.63
RIF1Q5UIP0 AC122688.1-201ENST00000541494 223 ntBASIC4.88□□□□□ -1.63
RIF1Q5UIP0 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 AC106785.1-201ENST00000565935 262 ntBASIC4.88□□□□□ -1.63
RIF1Q5UIP0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 AL354766.1-201ENST00000423396 542 ntBASIC4.88□□□□□ -1.63
RIF1Q5UIP0 OR10T1P-201ENST00000424327 947 ntBASIC4.88□□□□□ -1.63
RIF1Q5UIP0 H3F3BP1-201ENST00000440551 403 ntBASIC4.88□□□□□ -1.63
RIF1Q5UIP0 AC079922.1-201ENST00000443291 359 ntBASIC4.88□□□□□ -1.63
RIF1Q5UIP0 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 HMGB1P4-201ENST00000455362 567 ntBASIC4.88□□□□□ -1.63
RIF1Q5UIP0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 RN7SL339P-201ENST00000580597 296 ntBASIC4.88□□□□□ -1.63
RIF1Q5UIP0 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RIF1Q5UIP0 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms