Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC245036.5-201ENST00000596330 847 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.36□□□□□ -1.55
RAE1P78406 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.36□□□□□ -1.55
RAE1P78406 AC009237.13-201ENST00000603193 276 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AC113368.1-201ENST00000603736 382 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AC108865.2-201ENST00000606881 432 ntBASIC5.36□□□□□ -1.55
RAE1P78406 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.36□□□□□ -1.55
RAE1P78406 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.36□□□□□ -1.55
RAE1P78406 RN7SL544P-201ENST00000617232 284 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AP005431.1-201ENST00000618479 319 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AL355493.4-201ENST00000618530 292 ntBASIC5.36□□□□□ -1.55
RAE1P78406 RN7SL763P-201ENST00000620922 284 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AP002791.1-201ENST00000623291 381 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AC017104.5-201ENST00000637647 639 ntBASIC5.36□□□□□ -1.55
RAE1P78406 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 AC099786.3-201ENST00000565735 1410 ntBASIC5.36□□□□□ -1.55
RAE1P78406 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.36□□□□□ -1.55
RAE1P78406 NCOA4P2-201ENST00000340589 1813 ntBASIC5.36□□□□□ -1.55
RAE1P78406 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.36□□□□□ -1.55
RAE1P78406 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.36□□□□□ -1.55
RAE1P78406 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 MRE11P1-201ENST00000464884 2127 ntBASIC5.36□□□□□ -1.55
RAE1P78406 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RAE1P78406 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RAE1P78406 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RAE1P78406 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.36□□□□□ -1.55
RAE1P78406 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
RAE1P78406 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.35□□□□□ -1.55
RAE1P78406 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 AC007938.2-201ENST00000604666 2634 ntBASIC5.35□□□□□ -1.55
RAE1P78406 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RAE1P78406 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.35□□□□□ -1.55
RAE1P78406 AC020656.2-201ENST00000613291 5309 ntBASIC5.35□□□□□ -1.55
RAE1P78406 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 CASC19-281ENST00000642118 1554 ntBASIC5.35□□□□□ -1.55
RAE1P78406 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.35□□□□□ -1.55
RAE1P78406 AC017007.4-201ENST00000503353 1352 ntBASIC5.35□□□□□ -1.55
RAE1P78406 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.35□□□□□ -1.55
RAE1P78406 RNU6-932P-201ENST00000391108 106 ntBASIC5.35□□□□□ -1.55
RAE1P78406 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
RAE1P78406 AC245060.4-201ENST00000413293 1121 ntBASIC5.35□□□□□ -1.55
RAE1P78406 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.35□□□□□ -1.55
RAE1P78406 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 AC023128.2-201ENST00000420880 1223 ntBASIC5.35□□□□□ -1.55
RAE1P78406 ETF1P3-201ENST00000430422 1160 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.35□□□□□ -1.55
RAE1P78406 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.35□□□□□ -1.55
RAE1P78406 DNAJA1P5-201ENST00000440278 943 ntBASIC5.35□□□□□ -1.55
RAE1P78406 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 AC023271.1-201ENST00000445936 1090 ntBASIC5.35□□□□□ -1.55
RAE1P78406 SEPT14P24-201ENST00000447236 180 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AL451063.1-201ENST00000450164 1133 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AP006222.1-205ENST00000450734 457 ntBASIC5.35□□□□□ -1.55
RAE1P78406 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 ACA64.1-201ENST00000459171 127 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AC022215.1-201ENST00000481770 362 ntBASIC5.35□□□□□ -1.55
RAE1P78406 ATP5LP5-201ENST00000483050 299 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.35□□□□□ -1.55
RAE1P78406 RPS27AP16-201ENST00000492222 470 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AC134050.1-201ENST00000495088 933 ntBASIC5.35□□□□□ -1.55
RAE1P78406 MTND4LP2-201ENST00000502312 285 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.35□□□□□ -1.55
RAE1P78406 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.35□□□□□ -1.55
RAE1P78406 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.35□□□□□ -1.55
RAE1P78406 AC093752.1-206ENST00000511823 336 ntBASIC5.35□□□□□ -1.55
RAE1P78406 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.35□□□□□ -1.55
RAE1P78406 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.35□□□□□ -1.55
RAE1P78406 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.35□□□□□ -1.55
RAE1P78406 DUX4L52-201ENST00000549363 777 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AC011611.5-201ENST00000552477 578 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AC107958.1-201ENST00000556576 290 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.35□□□□□ -1.55
RAE1P78406 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.35□□□□□ -1.55
RAE1P78406 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.35□□□□□ -1.55
RAE1P78406 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.35□□□□□ -1.55
RAE1P78406 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.35□□□□□ -1.55
RAE1P78406 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.35□□□□□ -1.55
RAE1P78406 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.35□□□□□ -1.55
RAE1P78406 AC011374.2-201ENST00000607135 526 ntBASIC5.35□□□□□ -1.55
RAE1P78406 MIR6133-201ENST00000617057 108 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AL158062.1-201ENST00000619632 745 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AC011330.2-201ENST00000621680 635 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AC129915.3-201ENST00000634128 948 ntBASIC5.35□□□□□ -1.55
RAE1P78406 AC016745.2-201ENST00000608834 3443 ntBASIC5.35□□□□□ -1.55
RAE1P78406 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAE1P78406 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.35□□□□□ -1.55
RAE1P78406 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms