Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CDH11P55287 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH11P55287 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH11P55287 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH11P55287 AC003973.3-201ENST00000624863 2822 ntBASIC4.96□□□□□ -1.62
CDH11P55287 OR9K1P-201ENST00000326513 941 ntBASIC4.96□□□□□ -1.62
CDH11P55287 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH11P55287 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDH11P55287 OR1L6-202ENST00000373684 1044 ntBASIC4.96□□□□□ -1.62
CDH11P55287 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH11P55287 OR6E1P-201ENST00000414424 923 ntBASIC4.96□□□□□ -1.62
CDH11P55287 RPS26P4-201ENST00000431743 355 ntBASIC4.96□□□□□ -1.62
CDH11P55287 ZNF965P-201ENST00000432501 817 ntBASIC4.96□□□□□ -1.62
CDH11P55287 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 RPL19P16-201ENST00000433839 588 ntBASIC4.96□□□□□ -1.62
CDH11P55287 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH11P55287 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH11P55287 AC016772.1-201ENST00000444170 1261 ntBASIC4.96□□□□□ -1.62
CDH11P55287 AC005297.1-201ENST00000444765 862 ntBASIC4.96□□□□□ -1.62
CDH11P55287 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH11P55287 AC110749.1-201ENST00000462007 357 ntBASIC4.96□□□□□ -1.62
CDH11P55287 RN7SL583P-201ENST00000475692 287 ntBASIC4.96□□□□□ -1.62
CDH11P55287 RN7SL177P-201ENST00000476596 299 ntBASIC4.96□□□□□ -1.62
CDH11P55287 AC104629.1-201ENST00000494226 508 ntBASIC4.96□□□□□ -1.62
CDH11P55287 EIF3LP3-201ENST00000495197 822 ntBASIC4.96□□□□□ -1.62
CDH11P55287 IGBP1P4-201ENST00000503202 879 ntBASIC4.96□□□□□ -1.62
CDH11P55287 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH11P55287 HMGN1P15-201ENST00000513870 295 ntBASIC4.96□□□□□ -1.62
CDH11P55287 HMGN1P9-201ENST00000515212 298 ntBASIC4.96□□□□□ -1.62
CDH11P55287 AC092709.1-201ENST00000521355 1045 ntBASIC4.96□□□□□ -1.62
CDH11P55287 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.96□□□□□ -1.62
CDH11P55287 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH11P55287 OR4V1P-201ENST00000525394 1140 ntBASIC4.96□□□□□ -1.62
CDH11P55287 AC090022.1-201ENST00000546569 311 ntBASIC4.96□□□□□ -1.62
CDH11P55287 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH11P55287 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDH11P55287 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH11P55287 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH11P55287 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH11P55287 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH11P55287 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH11P55287 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.96□□□□□ -1.62
CDH11P55287 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH11P55287 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH11P55287 BX323046.1-201ENST00000610145 535 ntBASIC4.96□□□□□ -1.62
CDH11P55287 AC079395.2-201ENST00000610982 737 ntBASIC4.96□□□□□ -1.62
CDH11P55287 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.96□□□□□ -1.62
CDH11P55287 AC007683.2-201ENST00000624681 714 ntBASIC4.96□□□□□ -1.62
CDH11P55287 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH11P55287 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.96□□□□□ -1.62
CDH11P55287 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
CDH11P55287 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
CDH11P55287 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CDH11P55287 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CDH11P55287 AL356317.1-201ENST00000396110 1436 ntBASIC4.96□□□□□ -1.62
CDH11P55287 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH11P55287 AC003985.2-201ENST00000562268 1669 ntBASIC4.96□□□□□ -1.62
CDH11P55287 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CDH11P55287 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH11P55287 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 YES1P1-201ENST00000418510 1628 ntBASIC4.95□□□□□ -1.62
CDH11P55287 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH11P55287 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH11P55287 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH11P55287 SNORA48.4-201ENST00000391089 134 ntBASIC4.95□□□□□ -1.62
CDH11P55287 PTGES3P2-201ENST00000407942 482 ntBASIC4.95□□□□□ -1.62
CDH11P55287 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 Z68694.1-201ENST00000413929 841 ntBASIC4.95□□□□□ -1.62
CDH11P55287 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH11P55287 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.95□□□□□ -1.62
CDH11P55287 AC113412.1-201ENST00000425840 504 ntBASIC4.95□□□□□ -1.62
CDH11P55287 FMO7P-201ENST00000436045 768 ntBASIC4.95□□□□□ -1.62
CDH11P55287 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH11P55287 AC092106.1-201ENST00000444291 373 ntBASIC4.95□□□□□ -1.62
CDH11P55287 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH11P55287 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.95□□□□□ -1.62
CDH11P55287 MTND6P5-201ENST00000448266 512 ntBASIC4.95□□□□□ -1.62
CDH11P55287 GAPDHP14-201ENST00000450472 937 ntBASIC4.95□□□□□ -1.62
CDH11P55287 CABYRP1-201ENST00000465493 1045 ntBASIC4.95□□□□□ -1.62
CDH11P55287 AC087672.1-201ENST00000479876 766 ntBASIC4.95□□□□□ -1.62
CDH11P55287 RPL5P22-201ENST00000480199 884 ntBASIC4.95□□□□□ -1.62
CDH11P55287 RN7SL629P-201ENST00000489622 285 ntBASIC4.95□□□□□ -1.62
CDH11P55287 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH11P55287 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms