Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL133173.1-201ENST00000423458 397 ntBASIC5.92□□□□□ -1.46
COPB1P53618 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.92□□□□□ -1.46
COPB1P53618 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.92□□□□□ -1.46
COPB1P53618 AL662874.1-201ENST00000426065 230 ntBASIC5.92□□□□□ -1.46
COPB1P53618 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.92□□□□□ -1.46
COPB1P53618 USP12PY-201ENST00000427677 1064 ntBASIC5.92□□□□□ -1.46
COPB1P53618 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.92□□□□□ -1.46
COPB1P53618 AC004854.1-201ENST00000440356 349 ntBASIC5.92□□□□□ -1.46
COPB1P53618 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.92□□□□□ -1.46
COPB1P53618 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.92□□□□□ -1.46
COPB1P53618 AC074386.1-201ENST00000476560 767 ntBASIC5.92□□□□□ -1.46
COPB1P53618 AC096571.1-202ENST00000506634 735 ntBASIC5.92□□□□□ -1.46
COPB1P53618 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.92□□□□□ -1.46
COPB1P53618 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.92□□□□□ -1.46
COPB1P53618 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COPB1P53618 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COPB1P53618 RNA5SP271-201ENST00000516700 88 ntBASIC5.92□□□□□ -1.46
COPB1P53618 RNU6-334P-201ENST00000517072 102 ntBASIC5.92□□□□□ -1.46
COPB1P53618 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.92□□□□□ -1.46
COPB1P53618 MTND2P32-201ENST00000521584 1038 ntBASIC5.92□□□□□ -1.46
COPB1P53618 CIR1P1-201ENST00000524055 1133 ntBASIC5.92□□□□□ -1.46
COPB1P53618 C1DP5-201ENST00000525775 383 ntBASIC5.92□□□□□ -1.46
COPB1P53618 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.92□□□□□ -1.46
COPB1P53618 YWHAZP1-201ENST00000556286 722 ntBASIC5.92□□□□□ -1.46
COPB1P53618 AC040958.1-201ENST00000561102 201 ntBASIC5.92□□□□□ -1.46
COPB1P53618 AC084759.1-201ENST00000561168 290 ntBASIC5.92□□□□□ -1.46
COPB1P53618 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
COPB1P53618 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.92□□□□□ -1.46
COPB1P53618 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.92□□□□□ -1.46
COPB1P53618 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COPB1P53618 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
COPB1P53618 AC068620.3-201ENST00000602749 560 ntBASIC5.92□□□□□ -1.46
COPB1P53618 OR51C1P-201ENST00000608504 942 ntBASIC5.92□□□□□ -1.46
COPB1P53618 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.92□□□□□ -1.46
COPB1P53618 AP003400.3-201ENST00000624904 346 ntBASIC5.92□□□□□ -1.46
COPB1P53618 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.92□□□□□ -1.46
COPB1P53618 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
COPB1P53618 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COPB1P53618 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
COPB1P53618 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.92□□□□□ -1.46
COPB1P53618 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.92□□□□□ -1.46
COPB1P53618 LINC02019-201ENST00000608605 2060 ntBASIC5.92□□□□□ -1.46
COPB1P53618 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPB1P53618 YES1P1-201ENST00000418510 1628 ntBASIC5.92□□□□□ -1.46
COPB1P53618 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.92□□□□□ -1.46
COPB1P53618 AC079298.1-201ENST00000625026 1619 ntBASIC5.92□□□□□ -1.46
COPB1P53618 AP005435.3-201ENST00000531260 3198 ntBASIC5.92□□□□□ -1.46
COPB1P53618 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COPB1P53618 AC106872.5-201ENST00000508856 1416 ntBASIC5.91□□□□□ -1.46
COPB1P53618 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.91□□□□□ -1.46
COPB1P53618 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COPB1P53618 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COPB1P53618 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COPB1P53618 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.91□□□□□ -1.46
COPB1P53618 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COPB1P53618 MTCO1P11-201ENST00000429111 1528 ntBASIC5.91□□□□□ -1.46
COPB1P53618 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COPB1P53618 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COPB1P53618 AC007618.1-201ENST00000366455 732 ntBASIC5.91□□□□□ -1.46
COPB1P53618 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COPB1P53618 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.91□□□□□ -1.46
COPB1P53618 GAPDHP42-201ENST00000406848 981 ntBASIC5.91□□□□□ -1.46
COPB1P53618 RNF19BPX-201ENST00000426224 625 ntBASIC5.91□□□□□ -1.46
COPB1P53618 AL645931.1-201ENST00000439737 410 ntBASIC5.91□□□□□ -1.46
COPB1P53618 AL450996.1-201ENST00000445574 1202 ntBASIC5.91□□□□□ -1.46
COPB1P53618 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COPB1P53618 AC092754.1-201ENST00000472975 479 ntBASIC5.91□□□□□ -1.46
COPB1P53618 AC098862.1-201ENST00000504991 413 ntBASIC5.91□□□□□ -1.46
COPB1P53618 MTND6P2-201ENST00000512226 524 ntBASIC5.91□□□□□ -1.46
COPB1P53618 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.91□□□□□ -1.46
COPB1P53618 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.91□□□□□ -1.46
COPB1P53618 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.91□□□□□ -1.46
COPB1P53618 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.91□□□□□ -1.46
COPB1P53618 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.91□□□□□ -1.46
COPB1P53618 IGBP1P1-201ENST00000554337 1009 ntBASIC5.91□□□□□ -1.46
COPB1P53618 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.91□□□□□ -1.46
COPB1P53618 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.91□□□□□ -1.46
COPB1P53618 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.91□□□□□ -1.46
COPB1P53618 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.91□□□□□ -1.46
COPB1P53618 MIR3614-201ENST00000581261 86 ntBASIC5.91□□□□□ -1.46
COPB1P53618 AC012616.1-201ENST00000600294 197 ntBASIC5.91□□□□□ -1.46
COPB1P53618 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.91□□□□□ -1.46
COPB1P53618 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.91□□□□□ -1.46
COPB1P53618 AL118522.2-201ENST00000616045 615 ntBASIC5.91□□□□□ -1.46
COPB1P53618 AC073342.3-201ENST00000624211 193 ntBASIC5.91□□□□□ -1.46
COPB1P53618 AL109659.3-201ENST00000624985 950 ntBASIC5.91□□□□□ -1.46
COPB1P53618 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COPB1P53618 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COPB1P53618 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.91□□□□□ -1.46
COPB1P53618 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.91□□□□□ -1.46
COPB1P53618 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COPB1P53618 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COPB1P53618 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
COPB1P53618 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
COPB1P53618 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COPB1P53618 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COPB1P53618 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.9□□□□□ -1.46
COPB1P53618 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.9□□□□□ -1.46
COPB1P53618 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
COPB1P53618 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms