Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PRELID3BP5-201ENST00000508612 460 ntBASIC6.09□□□□□ -1.44
NUP98P52948 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.09□□□□□ -1.44
NUP98P52948 RNU6-709P-201ENST00000517257 104 ntBASIC6.09□□□□□ -1.44
NUP98P52948 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.09□□□□□ -1.44
NUP98P52948 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.09□□□□□ -1.44
NUP98P52948 AC008782.1-201ENST00000603386 430 ntBASIC6.09□□□□□ -1.44
NUP98P52948 FAM27B-201ENST00000610601 213 ntBASIC6.09□□□□□ -1.44
NUP98P52948 AC243960.7-201ENST00000623532 707 ntBASIC6.09□□□□□ -1.44
NUP98P52948 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.08□□□□□ -1.44
NUP98P52948 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.08□□□□□ -1.44
NUP98P52948 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
NUP98P52948 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
NUP98P52948 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.08□□□□□ -1.44
NUP98P52948 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.08□□□□□ -1.44
NUP98P52948 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.08□□□□□ -1.44
NUP98P52948 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
NUP98P52948 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
NUP98P52948 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 RNU4-25P-201ENST00000410569 230 ntBASIC6.08□□□□□ -1.44
NUP98P52948 RPL12P9-201ENST00000412942 488 ntBASIC6.08□□□□□ -1.44
NUP98P52948 RPL7P57-201ENST00000423238 740 ntBASIC6.08□□□□□ -1.44
NUP98P52948 NPM1P18-201ENST00000434232 732 ntBASIC6.08□□□□□ -1.44
NUP98P52948 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.08□□□□□ -1.44
NUP98P52948 AC133555.2-201ENST00000550213 292 ntBASIC6.08□□□□□ -1.44
NUP98P52948 AC040958.1-201ENST00000561102 201 ntBASIC6.08□□□□□ -1.44
NUP98P52948 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.08□□□□□ -1.44
NUP98P52948 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.08□□□□□ -1.44
NUP98P52948 AC018695.5-201ENST00000605872 315 ntBASIC6.08□□□□□ -1.44
NUP98P52948 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.08□□□□□ -1.44
NUP98P52948 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.08□□□□□ -1.44
NUP98P52948 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 Z98755.1-201ENST00000407015 1384 ntBASIC6.08□□□□□ -1.44
NUP98P52948 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.08□□□□□ -1.44
NUP98P52948 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
NUP98P52948 AC004817.4-201ENST00000602396 3625 ntBASIC6.07□□□□□ -1.44
NUP98P52948 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUP98P52948 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NUP98P52948 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.07□□□□□ -1.44
NUP98P52948 COX6CP17-201ENST00000421389 185 ntBASIC6.07□□□□□ -1.44
NUP98P52948 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.07□□□□□ -1.44
NUP98P52948 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.07□□□□□ -1.44
NUP98P52948 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.07□□□□□ -1.44
NUP98P52948 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.07□□□□□ -1.44
NUP98P52948 OR52E3P-201ENST00000452083 936 ntBASIC6.07□□□□□ -1.44
NUP98P52948 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUP98P52948 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.07□□□□□ -1.44
NUP98P52948 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.07□□□□□ -1.44
NUP98P52948 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.07□□□□□ -1.44
NUP98P52948 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.07□□□□□ -1.44
NUP98P52948 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.07□□□□□ -1.44
NUP98P52948 AC022726.1-201ENST00000587475 207 ntBASIC6.07□□□□□ -1.44
NUP98P52948 AC011944.2-201ENST00000624440 683 ntBASIC6.07□□□□□ -1.44
NUP98P52948 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUP98P52948 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUP98P52948 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NUP98P52948 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
NUP98P52948 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUP98P52948 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUP98P52948 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.07□□□□□ -1.44
NUP98P52948 AC004158.1-201ENST00000564508 4319 ntBASIC6.07□□□□□ -1.44
NUP98P52948 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
NUP98P52948 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.06□□□□□ -1.44
NUP98P52948 RNU11-201ENST00000387069 134 ntBASIC6.06□□□□□ -1.44
NUP98P52948 RPS27AP6-201ENST00000427962 448 ntBASIC6.06□□□□□ -1.44
NUP98P52948 CBX1P1-201ENST00000440184 427 ntBASIC6.06□□□□□ -1.44
NUP98P52948 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.06□□□□□ -1.44
NUP98P52948 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.06□□□□□ -1.44
NUP98P52948 RN7SKP92-201ENST00000517266 244 ntBASIC6.06□□□□□ -1.44
NUP98P52948 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP98P52948 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP98P52948 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.06□□□□□ -1.44
NUP98P52948 AL360012.1-201ENST00000602813 131 ntBASIC6.06□□□□□ -1.44
NUP98P52948 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.06□□□□□ -1.44
NUP98P52948 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.06□□□□□ -1.44
NUP98P52948 AC009704.2-201ENST00000618739 483 ntBASIC6.06□□□□□ -1.44
NUP98P52948 AC021106.3-201ENST00000623925 531 ntBASIC6.06□□□□□ -1.44
NUP98P52948 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NUP98P52948 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.06□□□□□ -1.44
NUP98P52948 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP98P52948 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP98P52948 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NUP98P52948 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP98P52948 AP005432.1-201ENST00000580891 3485 ntBASIC6.06□□□□□ -1.44
NUP98P52948 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP98P52948 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
NUP98P52948 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.06□□□□□ -1.44
NUP98P52948 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP98P52948 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
NUP98P52948 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms