Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DMAP28067 Z82198.3-201ENST00000421145 199 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 AC004448.2-201ENST00000422360 586 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 AL139148.1-201ENST00000427122 680 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 AC005297.1-201ENST00000444765 862 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 ACA64.1-201ENST00000459171 127 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 AC008410.1-201ENST00000483777 339 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 RNA5SP228-201ENST00000516232 133 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 AC005868.1-201ENST00000536421 331 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 AC011500.1-201ENST00000601963 469 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 AL133406.3-201ENST00000606817 541 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DMAP28067 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DMAP28067 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DMAP28067 AL592182.3-201ENST00000642132 3304 ntBASIC4.43□□□□□ -1.7
HLA-DMAP28067 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DMAP28067 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DMAP28067 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DMAP28067 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DMAP28067 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DMAP28067 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DMAP28067 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 TLK1P1-201ENST00000456760 2440 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DMAP28067 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DMAP28067 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DMAP28067 RPL5P19-201ENST00000404228 893 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 HDGFP1-201ENST00000405943 252 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 GAPDHP42-201ENST00000406848 981 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC009302.1-201ENST00000417147 390 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DMAP28067 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 AL133173.1-201ENST00000423458 397 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DMAP28067 CLUHP1-201ENST00000435012 1190 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AL512637.1-201ENST00000439523 1231 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AMYP1-201ENST00000440059 1023 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AL450996.1-201ENST00000445574 1202 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 PTMAP3-201ENST00000447474 330 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DMAP28067 AL133244.1-201ENST00000456007 258 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 RN7SL423P-201ENST00000486202 304 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC005412.2-201ENST00000492004 341 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 RN7SL568P-201ENST00000493069 298 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 HSD3BP3-201ENST00000514706 994 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 RN7SKP99-201ENST00000517028 307 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC005341.1-201ENST00000571086 708 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC133552.5-201ENST00000604266 540 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AL713998.2-201ENST00000604538 1198 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC026979.4-201ENST00000606555 645 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC023813.4-201ENST00000607580 580 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AL135786.2-201ENST00000608422 615 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AL118522.2-201ENST00000616045 615 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC005899.6-201ENST00000620729 297 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC055839.1-201ENST00000634467 498 ntBASIC4.42□□□□□ -1.7
HLA-DMAP28067 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DMAP28067 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DMAP28067 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DMAP28067 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DMAP28067 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DMAP28067 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DMAP28067 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DMAP28067 RNA5SP232-201ENST00000364144 119 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms